Gene Dd703_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3438 
Symbol 
ID8089392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4007090 
End bp4007911 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content54% 
IMG OID644837516 
ProductNLPA lipoprotein 
Protein accessionYP_002989020 
Protein GI242240839 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTCA AAAAGATTAT GCAAGGCTGT TTTTTCCTGT TTTTGCTGGT CGCGCAGGCA 
CATGCGGACG AGCAAAAGAA CATCCTGATC GGCGTGTCGC CGGGGCCGTA TGGCGATATG
GTCACGCAGG CGATCAAGCC GATTCTGGCG AAGCAAGGGT ATGATGTCCG CGTCAAGGAG
TTCAGCGATT ACATCCAACC GAACATGGCG TTGGTCAACA AGAGTATCGA CGCGAATCTG
TTCCAGAACC GACGTTATCT TGACCGTTTC AGCGCTGATA AAGGGCTGAA GTTATCGGAA
ATCATTACTG TCCCGACCGC CAGTATGGGG TTCTATTCCA ACAAGGTGAA ATCGCTGGGC
GACCTGAAAG CCGGTGATGT GGTGATTCTG CCGAATGACC CTTCCAACCT GGCGCGTTCG
CTGGAGTTTT TGCAGAAGTA TGGCCTGATC ACGCTGAGCC CGGGGATTTC TCCCACTAAA
GCGTCGCTGA AAGACATTGG CGAAAACCCG AAAGGGTTGG TTTTTAAACC GCTGGAGGCG
GCACAGCTAC CGCGCGCAAT GGGCGGCGTC ACCGGTGCGC TGATTAACGC CAATTTCGCC
ATTGCTTCCG GGCTGAAACT GTCCGACGCC ATTCAACTGG ACGTGCTGCC GGAAGACCTG
AAAAATATGC TGGTGGTGCG TGAGGAAGAC GCCGGGAAAC CTTTCGCCAA AGCGCTGAAG
GCGGCGGTGG AGTCTGATGA GTTCGCCGCA TTCTTCGACA GAAAAGACAC CATTTTTACC
GCGTTCCAGA AGCCGGAATG GATGAAAGCG AAGCACCCCT AA
 
Protein sequence
MLFKKIMQGC FFLFLLVAQA HADEQKNILI GVSPGPYGDM VTQAIKPILA KQGYDVRVKE 
FSDYIQPNMA LVNKSIDANL FQNRRYLDRF SADKGLKLSE IITVPTASMG FYSNKVKSLG
DLKAGDVVIL PNDPSNLARS LEFLQKYGLI TLSPGISPTK ASLKDIGENP KGLVFKPLEA
AQLPRAMGGV TGALINANFA IASGLKLSDA IQLDVLPEDL KNMLVVREED AGKPFAKALK
AAVESDEFAA FFDRKDTIFT AFQKPEWMKA KHP