Gene Dd703_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3338 
Symbol 
ID8089288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3907682 
End bp3908560 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID644837414 
Productpeptidase U32 
Protein accessionYP_002988922 
Protein GI242240741 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACT CACTGGGCGC CATTCTCTAC TACTGGCCCA AAGCCGAGAT TGAGACCTTT 
TATCAGGCTG CAATCGCCAG CAACGCCGAT ATCATTTATC TGGGCGAGAC TGTCTGCAGT
AAACGCCGCG GCATGAAAGT GAACGATTGG CTCGCACTGG CGCGTGACAT TACCGCCGCC
GGCAAACAGG TGGTGATATC GACGTTAGCT TTACTGCAAG CACCTTCTGA ACTGAACGAG
CTGAAACGTT ATGTGGAAAA CGGTGAATTT TTGCTGGAGG CCAACGATTT AGGCGCAGTC
AACATGGCGG CTGAACGCCA TTTACCGTTC GTCGCCGGCC ACGCATTGAA CTGTTACAAC
GCCTATACGC TGCGCTTGCT GCACCGCCAG GGGATGGTGC GCTGGTGCAT GCCGGTGGAA
CTGTCCCGCG ACTGGCTACA GTGTCTGCTT AATCAGTGCG ACGAGCTGGG CTTCCGCCAT
CAGTTCGACG TAGAAGTGTT GAGCTACGGC CACCTGCCGC TGGCCTACTC CGCTCGCTGC
TTCACCGCTC GTTCGGAAAA CCGCGCCAAA GACGAGTGCG AAACCTGCTG CATCAACTAT
CCGCTGGGGC GTCAGGTTCT GTCGCAGGAG AATCAGCAAG TCTTCGTGCT CAACGGCATC
CAGACACAGA GCGGTTACTG TTACAACCTC GGTAATGAAT TAACCTCAAT GCAGGGTCTG
GTGGATATTG TCCGGCTTTC GCCGCAAGGC CTCGACACGC TGCAGATGCT CGACAGGTTC
CGCGCCAATG AACAGGGCGA ACATCCGCTC ACGTTGGAAA ATCAGGCCGA ATGCAATGGC
TACTGGAAAC GCCTTGCCGG GCTGGAACTG GTGCCCTGA
 
Protein sequence
MKYSLGAILY YWPKAEIETF YQAAIASNAD IIYLGETVCS KRRGMKVNDW LALARDITAA 
GKQVVISTLA LLQAPSELNE LKRYVENGEF LLEANDLGAV NMAAERHLPF VAGHALNCYN
AYTLRLLHRQ GMVRWCMPVE LSRDWLQCLL NQCDELGFRH QFDVEVLSYG HLPLAYSARC
FTARSENRAK DECETCCINY PLGRQVLSQE NQQVFVLNGI QTQSGYCYNL GNELTSMQGL
VDIVRLSPQG LDTLQMLDRF RANEQGEHPL TLENQAECNG YWKRLAGLEL VP