| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3328 |
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| Symbol | |
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| ID | 8089278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 3895808 |
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| End bp | 3898276 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644837404 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_002988912 |
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| Protein GI | 242240731 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.513174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGA CTACACCTGC TCGCACTGGC CTGCGCCAAA TTCTCCCTTC GCAAAAACCG
CTGACGATGG CGCTACACTT CGCGTTCGTC AGCCTGTCGT TGCCATACGC CGCGTCAGCC
AACGCGGCCC AGGAAAGTAC GACGACCCGC CACTACACCC TCGTTGCTGG CCCGCTTGGC
GGCTTGTTGA ACCAATTCGC CGCACAATCC GGCATCTATC TCGCCGCCGA CGCCAGCCTG
ACGCAGGGCC TGAGCGGCCC GGCGTTACAG GGCGATTATA CGGTGGATGA GGCGCTGCGA
CGTCTGTTGA GCGGCAGCGG ACTCACCGCA TCACGCCAGA CTGACGGCAG TTATGTACTG
AGAAAACTGG CGGACGGTGA GGAAATATAT GTTATTCGGC AGCCTGGCCT GAATGGCCCG
ACGGAAGACA CGGGCGCCTA CACCACCCGC AATCTGAGCA CGGCCACCCG GATGACGCTT
TCGCCGCGTG AAACGCCGCA ATCTGTCAGT GTCGTGACCC GCCAGCAAAT GGATGACCAG
AACATGACGT CACTGGAAGA CGCGATGGCC GTATCCCCCG GCGTTACCGT GGTGAAAGAG
AGCTCCTATC AGACCCGTTT CCAGTCCCGC GGTTTCATGA TGGACAACGT ACTGGAGAAT
GGTTCCGGCA GTTCGTTCCA GAACAGCGTA TCGGGCATGG GCTCGGCGGA ATCCTCCAGC
GAGTCGCCCG ATTTGGCGAT CTACGATCGA CTGGAAATTC TGCGCGGCGC GTCCGGGCTA
TTACAAGGCA ATGGTGAGCC AGGCGGTACC GTCAATCTGG TGCGCAAGAA ACCCACCTAC
GATTTTCGCA GCACACTCAG CACCAGTGCA GGCAGTTGGG ATAATTACCG TCAGGAAGCG
GATGTGTCCG GCCCGCTCAA TAACGACGGT TCGTTACGCG GCCGTTTTGT CGGCGTCACA
CAGAAAAAAG ACAGTTTTGT CAATGATGTA CAAAGTGAAC GCCATGTCAT GTACGGTACA
TTAGCCTATG ACCTCACCAG CGACACGACC GTCACCACCG GCGTCAACTG GCAGAAAACC
CGTACCGTAC CGGATCTGTA TGGCGTCCCG ATGTCCACCG ATTACGCCAG CCTCAATCTG
CCGCGCTCCA CCTTTTTGGG CGCCAGTTGG AACCGGATCA CCTTCGAAAA AATCAACACG
TTCGCAGAAC TGGAGCATCA TTTCAGCAAC GACTGGGCGC TGAAAAGCGC ACTCAATTAC
ACCCACTCTA CGGCTGTTGG TCGCTTTACC GGTATTTTCG GCAACGGCAC CGGCGGCGTC
GGCAGCAGCG GCACCGGGCG GCTCAACAAC CTGCTGGCGC GCGATAATCA GGCCGAGCAA
TGGAACTATA ACCTGACGCT GAATGGGCCG TTCAAACTGT TTGGGCAACA CCATGAGTTA
GTGGTGGGTG GGGATTACCA GAAGGAAAAC TTCGACAACC TATTTGGCCG GGTGAGCAAT
ACCAGCGTCG TCAATGTGTA TAGCTGGGAT CCCAGCTCGC TGGCGGAACC GACATGGCCC
AGCTACAGCA ACAATTACAC TTACGATCTC TACCAGCGCG GCCTGTTCAC CACCGCCCGC
TTTACTCTGG CAGATAACTG GAAGTGGATA GTCGGTACTC GCTATAGCAA CTTCAGCTAC
GCCAATACAT TACGCAATCT CAACAGCGGT ACCTCCAGCC AGACGCATTT TAAGGCCAAC
GAACAATGGA CGCCTTACAG CGGCCTGCTG TGGGATTTTG CCGATCACTA CACCTGGTAT
CTGAGTTACG CCGATATTTA CAAACCACAA GAAAATATCG ATAGCCGCGG CAATCTATTG
CCCGCCGTCA CCGGGAAAAA CTACGAAACC GGGGTGAAAA GTGAATTCCT CGACGGTGCA
TTGAACACCT CGGCGGCATT ATTCCGTATC GTGCAGGAAA ACCGGGCAGT TGAAGATACC
GATTGCCGGG TCTCCACCAC CTGCTACCGC GCTGACGGCA AGGTAGAAAG CCAGGGGCTG
GAATTGGAAG CCGCAGGCAA ACTGGCGATG GGCTGGCAGG TATCCGCCGG TTATACGCTG
ACCAACAGCA AGTACCTGAA ATCTGATGAG AGCACACAGG GTCGCCGTTA CAGCCTCAAT
ACGCCGCAAC ATCAGTTCAA GCTCTACACC CGCTATCAAT TACCCGGCAA CCTGAACCAA
TGGACCGTGG GCGCAGGATT GACCGCGCAA ACCGACACCA CCACCAGCAG AGGGATCACA
CAAGGGGGCT ATACGCTGTT CAACGCCAAC GTGAACTACC AGTACAACGC TCACCTCAGT
TTCAACCTGG CCGGATATAA CCTGACCGAT AAGGTGTACT ACGTGAACGT GTCGAATCGT
CATCGTGGCG GCAACAACTT CTATGGCGAC CCGCGTAATA TGATGTTAAC CGCCAAATGG
ACGTTCTGA
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| Protein sequence | MTLTTPARTG LRQILPSQKP LTMALHFAFV SLSLPYAASA NAAQESTTTR HYTLVAGPLG
GLLNQFAAQS GIYLAADASL TQGLSGPALQ GDYTVDEALR RLLSGSGLTA SRQTDGSYVL
RKLADGEEIY VIRQPGLNGP TEDTGAYTTR NLSTATRMTL SPRETPQSVS VVTRQQMDDQ
NMTSLEDAMA VSPGVTVVKE SSYQTRFQSR GFMMDNVLEN GSGSSFQNSV SGMGSAESSS
ESPDLAIYDR LEILRGASGL LQGNGEPGGT VNLVRKKPTY DFRSTLSTSA GSWDNYRQEA
DVSGPLNNDG SLRGRFVGVT QKKDSFVNDV QSERHVMYGT LAYDLTSDTT VTTGVNWQKT
RTVPDLYGVP MSTDYASLNL PRSTFLGASW NRITFEKINT FAELEHHFSN DWALKSALNY
THSTAVGRFT GIFGNGTGGV GSSGTGRLNN LLARDNQAEQ WNYNLTLNGP FKLFGQHHEL
VVGGDYQKEN FDNLFGRVSN TSVVNVYSWD PSSLAEPTWP SYSNNYTYDL YQRGLFTTAR
FTLADNWKWI VGTRYSNFSY ANTLRNLNSG TSSQTHFKAN EQWTPYSGLL WDFADHYTWY
LSYADIYKPQ ENIDSRGNLL PAVTGKNYET GVKSEFLDGA LNTSAALFRI VQENRAVEDT
DCRVSTTCYR ADGKVESQGL ELEAAGKLAM GWQVSAGYTL TNSKYLKSDE STQGRRYSLN
TPQHQFKLYT RYQLPGNLNQ WTVGAGLTAQ TDTTTSRGIT QGGYTLFNAN VNYQYNAHLS
FNLAGYNLTD KVYYVNVSNR HRGGNNFYGD PRNMMLTAKW TF
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