Gene Dd703_3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3326 
Symbol 
ID8089276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3894196 
End bp3894735 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID644837402 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002988910 
Protein GI242240729 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCCG TCAATACTGC CAGCCCTTCT GACCTTCAGC AGCTTTATCA GCAGCATCAC 
GGCTGGCTGC AAGGGCTGCT ATGCAAACGG CTGGGCAATC TGTGCGACGC CGCCGATCTG
GCGCACGATA TTTTTGTACA GTTGCTGACT CGTCCGCGTC ACTTCGACAG CCATGAAGGC
GCACGCGCCT ACCTCAGCGT GATGGCGCAG GGCCTGTGCG TCGATCTGTG GCGCCGCCGG
TCGCTGGAAC AGGCCTGGCG GCAGTCGTTG AACGACTGCG AACAGGTGCA TGCGCTATCT
GCCGAGCAAC ACACCATCAT TCTGGAAACC CTGTATCAGG TCGACGCCAT GTTGCGCCAA
TTGCCGGACA ATGTGCGCGT TGCCTTTATC CTGTCACAGA TTCAGGGGCA GACTTACGCG
CAGATCGCTA TCACACTCGG CGTCAGTGAG CGGATGGTGA AAAAATATAT GGCGCAGGCG
ATGCTGCACT GCATCTTGCT GGAAGCGGAG CATCATGGCC ACGAGGTCGT GCAGCCGTGA
 
Protein sequence
MSAVNTASPS DLQQLYQQHH GWLQGLLCKR LGNLCDAADL AHDIFVQLLT RPRHFDSHEG 
ARAYLSVMAQ GLCVDLWRRR SLEQAWRQSL NDCEQVHALS AEQHTIILET LYQVDAMLRQ
LPDNVRVAFI LSQIQGQTYA QIAITLGVSE RMVKKYMAQA MLHCILLEAE HHGHEVVQP