Gene Dd703_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3289 
Symbol 
ID8089236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand- 
Start bp3853065 
End bp3853736 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID644837362 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002988873 
Protein GI242240692 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTGG TGATACTGAG CGGGTTGTTG CTGTCGCTGT CGTTGTGTTT GGATCTGGGG 
ATCGTCAATA CCGCCATTAT TAACCGCGGC CTGCGGGATG GCGCGGGTTC AGCGTTTTTT 
ATCGGACTGG GTTCCTGCTT CGGCGATTTG ATTTATGCAT CGCTATCGGC GTTGGGCATG 
GTGGCGATCT TCAGCTATAC GCCGATTCGC TGGCTGCTGT GGATTGGCGG TGGCGCGGTG 
TTGATGTGGC TGTCCTGGTC GATGGCGCGT AGCGCCTGGC GGGATTATCG CCAACAGCGG 
GGGCTGAATG TGGCGGGTGA GCGAAGCGGG GCGGCGACGG TGATTGTTCC GGCGCACCGG 
GATTTCTTCA GCGGCGTCGG CATGGCGTTG GCATCCCCCA GCGCGTTGCT GTGGTTTGCC 
GCCGTCGGCG GTACGCTGAT CGCCCAGTCG ACCGATGGTT CCGTCGGGCA GGTGTCGCTG 
TTTCTGGCCG GTTTTTTTAG CGGCGGCGTA CTCTGGACGT TGTTTATGGC GCTGTTGGTG 
AAATACGGCC GCGGTGCGCT AAAAGGACGG CTCTCTTTTT ATTGCAGCGC GCTGTCGGCG 
GTGCTGTTCG CCGGGTTTGC CGCCCAGGTG ATCGTCAATG GATATCAGAC GTTATTACTG 
CCTTTGCGCT GA
 
Protein sequence
MLLVILSGLL LSLSLCLDLG IVNTAIINRG LRDGAGSAFF IGLGSCFGDL IYASLSALGM 
VAIFSYTPIR WLLWIGGGAV LMWLSWSMAR SAWRDYRQQR GLNVAGERSG AATVIVPAHR 
DFFSGVGMAL ASPSALLWFA AVGGTLIAQS TDGSVGQVSL FLAGFFSGGV LWTLFMALLV 
KYGRGALKGR LSFYCSALSA VLFAGFAAQV IVNGYQTLLL PLR