Gene Dd703_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3239 
Symbol 
ID8089185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3793446 
End bp3794840 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content61% 
IMG OID644837312 
Productamino acid permease-associated region 
Protein accessionYP_002988824 
Protein GI242240643 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCA GTCAGTTGAA AAAGAACAGT CTGGGGTTGT GGTCGCTGGT GTTTTTCGTG 
GTAGCCGCCG CCTCTCCGCT GACCGGAGTG GTCGGCGGAC TGCCGGTAGC GATCTCCGCC
GGCAATGGTG CGGGCATTCC GGCGGTCTAC ATCATGGCCG GCGCGATCCT GCTGGTGTTT
TCCTTCGGCT ATATCGCCAT GAGCCGCTAT GTCACCAATG CCGGCGCGTT TTACAGCTAT
ATCACGCTGG GGCTGGGACG GCGTACCGGC ATCAGCGCGC TGGCGGTGGC GCTGCTGGCC
TATTTCGCCA TCCAGATCGC GGTGGTGGCG ATGTTTGGTT TCTTCAGCAG TATGTATCTG
CACGAGCACT TTGGCGTGGA TCTGCCGTGG TGGCTGTACA GCCTGGTGAT GCTGCTGGTG
GTGTGCCTGC TGGGGATTGA GAGTGTGGAG ATCGGTGGGC GGGTGCTGGG TATTCTGATG
CTGATGGAGG TCGGCATCGT GTTGCTGACC GATGCGGCGG TGGTCTGGTC GCACGGTACG
ACGCCGCTGA CGCTAACCGC GTTCACACCG ACGGTGATCT ATCAGGGCAG CATCGGCATT
GCGCTGGTGT TCAGCATCGC CGCTTTTATC GGTTTCGAAT CCACCGCGAT TTACGGCGAA
GAGTGCCGCG ATCCGGCAAA AACCGTGCCG CGCGCCACCT TGATGGCGGT GGTGCTGATC
ATGCTGTTTT TCGCCGTAAC CAGTTGGGCG ATGGTGCAGG TATACGGCGT CGAACAGGTG
CGCGAACAGG CGGTGAACAA CCCTGGACGC TTTATCTTCG ATGTGGCGAC TCGGTTGTTG
GGCGGCTGGT CTGAACAGGT GATGTCGCTG CTGCTGATCA CTAGCCTGTT CGCCGCCACG
CAGGCGTTCC ACAACACTAT TTCCCGCTAT CTGTTCAGCA TCAGCCGCGA TGGTTTTCTG
TGGTCGAAAC TGGCGCGGGT GCGCGGCGGC AAAGGGACGC CCTATATCGC CAGCCTGGTG
CAAACCGGAT TGATGGCGGC GCTGCTGCTG GCGATGGTGG CCGCCGATCT CGACCCGATG
ATGCACATCT TCGCGCTGGG GTCGGCGATG GCGACCATGG CGATCCTGTT GCTGCAAGTG
GGCGTATCGC TGGCGGTGAT TCGATTCTTC CGGCGGGAGG TTCAGTTACC GGTCTCCGCC
TGGAGCCGGT TGTGGGCGCC GGCGATCTCC TCGGTAGCGA TGCTGGCGGC GCTGATCATG
GTGACTAGCA ATCTGGATAT TCTGAGCGGC TCTTCGTCCG GTTCGGTGGC GCTGATCCCT
TGGCTGGTTT TCGGTATGGC GGCGGTCGGT TATCTCTCCG CCTGCCGTGT CGGCGCGACG
CCTGCGAAGG GCTGA
 
Protein sequence
MNSSQLKKNS LGLWSLVFFV VAAASPLTGV VGGLPVAISA GNGAGIPAVY IMAGAILLVF 
SFGYIAMSRY VTNAGAFYSY ITLGLGRRTG ISALAVALLA YFAIQIAVVA MFGFFSSMYL
HEHFGVDLPW WLYSLVMLLV VCLLGIESVE IGGRVLGILM LMEVGIVLLT DAAVVWSHGT
TPLTLTAFTP TVIYQGSIGI ALVFSIAAFI GFESTAIYGE ECRDPAKTVP RATLMAVVLI
MLFFAVTSWA MVQVYGVEQV REQAVNNPGR FIFDVATRLL GGWSEQVMSL LLITSLFAAT
QAFHNTISRY LFSISRDGFL WSKLARVRGG KGTPYIASLV QTGLMAALLL AMVAADLDPM
MHIFALGSAM ATMAILLLQV GVSLAVIRFF RREVQLPVSA WSRLWAPAIS SVAMLAALIM
VTSNLDILSG SSSGSVALIP WLVFGMAAVG YLSACRVGAT PAKG