Gene Dd703_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3171 
Symbol 
ID8088468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3721813 
End bp3722877 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content61% 
IMG OID644837245 
ProductABC transporter related 
Protein accessionYP_002988757 
Protein GI242240576 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAT TACGCCTGAA TCAGATCGCC AAACAGTTTG GCAAGCAGCC GGTACTGCAT 
GGCATCGATC TGCATATTCG CCCCGGCGAA CTGGTGGTCT TCGTCGGCCC GTCGGGTTGT
GGAAAATCCA CGTTGCTGCG CACCATCGCC GGGCTGGAGC AACAGGACAG CGGCCAGATT
CTGCTGGATG GCCGGGATAT TTCCCGCCAG CCGCCGGGCG CCCGAGAAAT GGCGATGGTG
TTCCAGTCCT ACGCGCTTTA TCCACATATG ACCGTGGCGG ACAACATGGG CTTCGCCCTC
AAGATGGCGG GCATGCCGCG TCAGAGCATC GACGAAAAGG TGCGCCAGGT GGCCGAGATG
CTGCAACTCA CGCCATTGCT GCAACGCAAA CCGGCAGCCT TATCCGGCGG ACAGCGTCAG
CGCGTGGCTA TCGGCCGCGC CATCGTGCGT CAACCGCGCC TGTTCCTGTT TGATGAACCG
CTGTCTAATC TGGATGCCAA ACTGCGTACC CACACCCGTG TGCAAATCAA GGCGCTGCAC
CAGCAACTGG AGGCGACCAT GATTTACGTC ACCCACGATC AGGTGGAAGC CATGACGCTG
GCTGATCGCA TCGTGGTGTT GCGCGACGGC CGGATAGCCC AGGTCGGTAC GCCGGAAGCG
CTGTACCACC AGCCCGCCAA TACCTTTGTG GCGGGGTTCA TCGGTACGCC GGAAATGAAC
ATCTTCCCGC TATCGCCGCA ACAACCGGCG TTGCCGTGGT TACAGCACAT TGCACGGGAT
CCCCGCGCCG CCACGCTCGG CGTAAGGCCG GATGCGTTCG AAATCAAACC GGGCGGAGGC
GTCTTTCAGG TCGATCTGGT GGAAAACCTC GGCGCGCTGT ATCACCTGCA TGGTCATTTT
ATTCATCAGC CGGGCGTGAC GGCGGTGGTG GAAAGCCGTC AACCCGCGCA TACCGGCAGC
CAACTGGCGT TACAGGTCGC GCCTGAGCGT TGTCATTGGT TCGATGCCGA GGGGATGCGT
CTGCCCGATG TCCCCACCCC TCACCGTCAG ACGCAGGAGC ACTAA
 
Protein sequence
MSELRLNQIA KQFGKQPVLH GIDLHIRPGE LVVFVGPSGC GKSTLLRTIA GLEQQDSGQI 
LLDGRDISRQ PPGAREMAMV FQSYALYPHM TVADNMGFAL KMAGMPRQSI DEKVRQVAEM
LQLTPLLQRK PAALSGGQRQ RVAIGRAIVR QPRLFLFDEP LSNLDAKLRT HTRVQIKALH
QQLEATMIYV THDQVEAMTL ADRIVVLRDG RIAQVGTPEA LYHQPANTFV AGFIGTPEMN
IFPLSPQQPA LPWLQHIARD PRAATLGVRP DAFEIKPGGG VFQVDLVENL GALYHLHGHF
IHQPGVTAVV ESRQPAHTGS QLALQVAPER CHWFDAEGMR LPDVPTPHRQ TQEH