| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3062 |
|---|
| Symbol | |
|---|
| ID | 8089898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3566947 |
|---|
| End bp | 3568551 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644837143 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002988655 |
|---|
| Protein GI | 242240474 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.838657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATA AACTTTATCT TAAAAGTAAT GTTATTGCTG AGCCTCTTTG GAATCAATGG
TATGCCTGGA CATTCTTGAT TCAACCCGTC ACCGCAGCGT TTCTCAATGA ACATCATCTG
CGTATTTTGG AATCCTATGT TGAAGCGCCG GATCTGCACG CGATGGCGGC GAAAAAATCG
GCCCTGCGTG GTGGTGCCTT TTTAGAAAAT ACCGGGGAAG TGGCTGCCGT ACAGGCGCTT
ATCGAGCAAA CCAAAATCAG GCTTGGTAAA CACCGTGAGC TTGTGCAGGC GATTAAAAAG
CTGGAAATAT TATTGCAGCA AGAGGCTAAC GGGGGATCGC TCGATTCCTT TTATGATCAC
ATTGACCCTT GCCTGAAAGG GTATATTGAA ATTGTGTATG ACCTCAACCA TACCCCAAAA
ATCCGCTTTA TAGAGCCACT CTTTTATCGC AGCGAATTTT ACGATGAAAC GTTGCAGAGT
ATTTCTCTGT CAGAGTCCTC TGTTGATGGG CGAGCTTTCG TATTAAGCAG TCCTCGCTTT
GCCAGCGATA CTGCGCTTCA TATTGCTATG CCATTTCGTA ACGCCGCGTG GGACGAGCTC
TTTGCAATGC GTTGGCGTGG CACAACGCAG GCACAGTTGG AACAATGGTT GTGTCGGGCG
CTTGGAGAGG TATCGCCGAC GCAATTAGCG CTATTTAGCC GTTTTTTTAC CACACGCCCA
CCGGAAGCAA AAAAAGACCG TGAATATCAC GGGGACGGTG TTCGGGTGCG CTACTTTGGT
CATGCCACCG TGTTAGTGCA GACCCGGAAC GTTACGGTGA TGACCGATCC TATCGTTTGC
TATCCCTTGG CGGGGGACGA TAATCGCTAT ACTTTCGATG ATCTGCCGGA AAAAATAGAT
TATGTGGTCA TTACCCATAA TCATCAGGAT CATGTCATGT TCGAGACGCT ACTGCAGCTT
CGACACAAGA TAGGAACGAT CGTGGTGCCC AGATGTTCCG GCGGCGATCT ACAGGACCCT
TCATTGCGGT TGACCTTGAA TGCCATTGGG TTCGATCGTG TTGTTGAATT GGCGGAGTTG
CAATCCCTCG ATATTGAAGA CGGTAACATT ACCGGGCTAC CGTTCTTGGG AGAACATGGC
GATCTGGATA TCAGGAGTAA ACTCGCGTAC TGCGTGCAAC TGAACGATAA GCGTTTTCTG
TTTGCCGCCG ACTCCAACAA TCTGGACGAT CACCTGTATG GCAAGATACG GCAAGTCGTG
GGCAATATTG ACCATCTGTT TATTGGCATG GAGTGTGCGG GAGCGCCCCT CTCTTGGGTA
TATGGCCCTC TCTACACCAA ACCTCTCGCC TATAAAATCA ATCAATCGCG TCGTTTAAAC
GGCAGTAATT TTGAGCGGGC GTTCAATATC GTCAAGCATT TCTCCGCGCA GGGCGCGTAT
ATTTATGCCA TGGGCGCGGA GCCTTGGTTA ACCTTTATTT CCAGTATTTT CTATGAAGCT
GACTCAGCGC CGATCCTGGA ATCGGAGCAA TTTGTGGCCG CCTGCCATAG TCAGGGAATA
GATTCCCGGC TCCTCTATGG CCGAGACGAA ATGGAGCTGT TATGA
|
|---|
| Protein sequence | MNDKLYLKSN VIAEPLWNQW YAWTFLIQPV TAAFLNEHHL RILESYVEAP DLHAMAAKKS
ALRGGAFLEN TGEVAAVQAL IEQTKIRLGK HRELVQAIKK LEILLQQEAN GGSLDSFYDH
IDPCLKGYIE IVYDLNHTPK IRFIEPLFYR SEFYDETLQS ISLSESSVDG RAFVLSSPRF
ASDTALHIAM PFRNAAWDEL FAMRWRGTTQ AQLEQWLCRA LGEVSPTQLA LFSRFFTTRP
PEAKKDREYH GDGVRVRYFG HATVLVQTRN VTVMTDPIVC YPLAGDDNRY TFDDLPEKID
YVVITHNHQD HVMFETLLQL RHKIGTIVVP RCSGGDLQDP SLRLTLNAIG FDRVVELAEL
QSLDIEDGNI TGLPFLGEHG DLDIRSKLAY CVQLNDKRFL FAADSNNLDD HLYGKIRQVV
GNIDHLFIGM ECAGAPLSWV YGPLYTKPLA YKINQSRRLN GSNFERAFNI VKHFSAQGAY
IYAMGAEPWL TFISSIFYEA DSAPILESEQ FVAACHSQGI DSRLLYGRDE MELL
|
|---|
| |