Gene Dd703_2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2953 
Symbol 
ID8089786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3440502 
End bp3442349 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content33% 
IMG OID644837035 
ProductUvrD/REP helicase 
Protein accessionYP_002988550 
Protein GI242240369 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATAA TAAAAGATGA TGATTGGGTT CTAAAAGACA TCCAAGAAGT AGAAGACGAG 
GCTATGAAAG TAATACGGAA TAGCACAGAA CATAATCTTG TTCTTGCTGG TCCCGGTGCA
GGTAAAACCG AGTTATTAGC TCAGAAAGCA TGTTTCTTAA TTGAGACAGG AAAGTGCAGG
GATAAAAGAA TAATTGCATT GTCCTTTAAA AAAGATGCTG CGCAAAATCT TCAAGATCGA
GTTAACTCAC GACTTGACTT GAAATATAGA CAAAAGTTTG AGTCAACGAC ATTCGATGCA
TTTTGTAAAA GCATTGTAGA TAGATTTAAG AGTACACTTC CAGTGGCGTA TCGGCCTTCA
GATGATTATG AAATATATTT TCCTGAAAAT AAAAAATTCG TAGAAGAGGT TAAACGAGAT
GCCGTTGGTT TTGAGGGACT AACTGCGGAG GAACTTAAGA AATTAAAACA TAACAATTTC
GAAAATAATT ATATTGTTAG GCCTTATAAA AAGGGTGAAG AGCATTCGGT AGATGCTCGT
ATTAAACGAT TTGTTTGGTA TCGTTTATTG GAGGGAAAAT CCAAAGTTTC GTTTAAAATG
ATAAACTTCC TTGCGAATTA TATCATAAGA AACAATAAGT TCCTTTCAAA TGCTATTAAT
TCGACTTACG AATATGCTTT CATTGATGAG TTTCAAGATA CTACTTATCA ACAATACGAA
ATTTTCAAAA GTATTTTTTT AGATAAAAAA ATAAAAATAA CAGCTGTAGG TGATACTAAA
CAAAGAATAA TGGGATGGGC GGGAGCATTG CATAGTGCAT TTGAGATTTT TAAAAATGAC
TTTGCGATTG AACATCATAA TGAATTATTA AGTAATAGAA GATCGCTGAA AAATCTTATA
AGTTATCAAC GCATGATGGA GGCATTCATG AATCATGCTG ATAACAAACC TGAGATGGAG
TTAATCGAGA ATGAAGGTTC AGCAAAGTTA ATACAATTTG ATGAAAGCAA TATAGAAGGG
GCATACATAG CATTATGTAT CCAAAAATGG ATTGAAAAAG GGGTTGATGA AAGAGAAATA
TGTATCTTAT TCAGAAATCC GTCTAAACAT TACACGGATA AAATCATCTC ATCTCTACAA
GACTTGGATA TAAAGTGCCG CATCGAGAAT ACCTATCAGG AATTACTCAA TGAAGCAATA
GTTCAGTTAA TCTTAAAAAT GCTAATGTTT ACCTGCGATA AAAAGTCTAT TGAAGGCTGG
AATTCTACAA TGGAACTTTT ATGCAACATA AGAGGGGTAA ATAAAAGCAG AGATATTACT
CGTTTGGAAA AAGAGCTTAG TCGTTTTATA AAATCGAACA AGGACATCAA TGGAAATGTT
GTTGATTATA TATATGGATT AATAAGTATA TTTGGTATCG ATGAGATCAA GTCTTACTTC
CCACAATATA TAAATGGAAA TGGCTTGGAC TATACTATTA ATTCTCTTTC ACAACATCTG
GAAACTTTAG GTATCAAAGA TAATAAATTA GCAGCTATTG ATATGTTACT CGGAAATAAA
ACGATACCAC TTATGACGAT TCATAAAAGT AAAGGTTTGG AGTTTAAAAA AGTCATCGTC
GTAGGTCTTG AACCTGGTGC GTATTTTGGC GATGAAGAAG AGCAGATAGA AAATCAAAAA
ACAGTCTTTG TGGCATTTTC ACGAGCGATT GAAGAGGTCA TATTAACTCG CTGTGCAAAA
AGAGCTAACT GGTGGGATGA AGTATGTTCA CAAAATTTTT CTGAGATCCC ATTGATAACG
GATATGCTAA CCTATTGTGG TCTTGAAGCT GAGATTTATA AAGATTAA
 
Protein sequence
MPIIKDDDWV LKDIQEVEDE AMKVIRNSTE HNLVLAGPGA GKTELLAQKA CFLIETGKCR 
DKRIIALSFK KDAAQNLQDR VNSRLDLKYR QKFESTTFDA FCKSIVDRFK STLPVAYRPS
DDYEIYFPEN KKFVEEVKRD AVGFEGLTAE ELKKLKHNNF ENNYIVRPYK KGEEHSVDAR
IKRFVWYRLL EGKSKVSFKM INFLANYIIR NNKFLSNAIN STYEYAFIDE FQDTTYQQYE
IFKSIFLDKK IKITAVGDTK QRIMGWAGAL HSAFEIFKND FAIEHHNELL SNRRSLKNLI
SYQRMMEAFM NHADNKPEME LIENEGSAKL IQFDESNIEG AYIALCIQKW IEKGVDEREI
CILFRNPSKH YTDKIISSLQ DLDIKCRIEN TYQELLNEAI VQLILKMLMF TCDKKSIEGW
NSTMELLCNI RGVNKSRDIT RLEKELSRFI KSNKDINGNV VDYIYGLISI FGIDEIKSYF
PQYINGNGLD YTINSLSQHL ETLGIKDNKL AAIDMLLGNK TIPLMTIHKS KGLEFKKVIV
VGLEPGAYFG DEEEQIENQK TVFVAFSRAI EEVILTRCAK RANWWDEVCS QNFSEIPLIT
DMLTYCGLEA EIYKD