Gene Dd703_2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2833 
Symbol 
ID8089660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3306800 
End bp3307864 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content54% 
IMG OID644836911 
ProductABC transporter related 
Protein accessionYP_002988432 
Protein GI242240251 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.27535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAC CCGATGTGTT GACGGTTACG TCATTGAACT GCTGTTATCC TAACGTCCCG 
GTGCTGGACA ACATAAGCTT CTCCGTCCGG GAAGGTGAGA TGGTCTGTCT GTTGGGGGCC
AGTGGCGAGG GGAAAACAAC GCTGCTGAAA TCCATTGCCG GGTTGCTGGC ATTCGAACAA
GGCCGTATCA CGATCGCCAA TCAGAACGTG GGCGATCCGG CGGGGGGGGC TCTCGCGCCC
AATTCGGTCG GTATGATTTT TCAGGACGAC GTGCTGTTTC CCCACCTGAC TGTGATGGAA
AATATTACGT TTGGTCTGCG CGATAAATCC ACTGACGAAA TAAAGGCGAT CACCGAAGAC
GTGGCGGCAT TGATGCGTTT AGCGGCGTTT ACCCGCTGTT ACCCGCATGA ATTGTCGAAA
GGCCAGCATC AACGGGTGGC GATCGCCCGT ACATTGGCGT GCCAGCCCAA ACTGTTGCTG
TTGGATGAAC CGTTTTCCAA CATCGATAGC CAGATACGTT ATCAGTTGCT CAGCGAGTTG
CGTAAGATAC TGAAACAGCG CCAGATTGCA GCGTTATTCG CCACATCAGA TCGCGAAGAT
GCCTTTACCT TCGCCGATCA TTTGATACTG ATACATGACG GCGGCATTGT GCAGCAGGGC
GTGTCGGCCG CGCTCTATTA CCGGCCGGTG AGCCGTTATG TGGCTGATTT TTTGGGCAAC
AGTAACTATC TTCCGGTGCG AATCACCGGC GATCGTTATT GGCAGAGCTT TCTGGGGGAT
CATCAGTCGC TGAGGTCTCT GAATCTGCCG TTGGGGGGCT ACGACTGGCT GGTGAGGCCG
CAGGAGATTG CGTTGGCGCT GGATGCCGAA AGCTCGGCAA TTGTTGTCGA TCGGCTATTC
ATGGGCAACA GCAACGTTTA TCACGTCCGG GTCAACGATA TGGAGTTGCA AGTACAAACA
GGAAACTGGT TTGAGCCTGG ACAGCAGGTC CGGCTCAGTA TCCGTACTGA TCAACCCGTA
TTTTTCCCAC AGATAGTGGT GGACACACAG GTTCCGCAGA CATAA
 
Protein sequence
MATPDVLTVT SLNCCYPNVP VLDNISFSVR EGEMVCLLGA SGEGKTTLLK SIAGLLAFEQ 
GRITIANQNV GDPAGGALAP NSVGMIFQDD VLFPHLTVME NITFGLRDKS TDEIKAITED
VAALMRLAAF TRCYPHELSK GQHQRVAIAR TLACQPKLLL LDEPFSNIDS QIRYQLLSEL
RKILKQRQIA ALFATSDRED AFTFADHLIL IHDGGIVQQG VSAALYYRPV SRYVADFLGN
SNYLPVRITG DRYWQSFLGD HQSLRSLNLP LGGYDWLVRP QEIALALDAE SSAIVVDRLF
MGNSNVYHVR VNDMELQVQT GNWFEPGQQV RLSIRTDQPV FFPQIVVDTQ VPQT