| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2692 |
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| Symbol | helD |
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| ID | 8088379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 3145876 |
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| End bp | 3147933 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644836764 |
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| Product | DNA helicase IV |
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| Protein accession | YP_002988291 |
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| Protein GI | 242240110 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGA AATCGACCGC TTTGGGTAAG CATTTGGCAC AGCATCCCTA CAATCGGGTG
GAATTGCTGA ATGCAGGGGT GCGTGTCAGT GGTGAGCGCC ATGAATATCT GATTCCGTTT
AATCAATTGC AGGCGATCCG TTGCAAAAAA GGACTGATTT GGGGAGAACT GGAGTTTGAA
TTACCGGATG GTCAGGTCGT CCGGCTCCAT GGTACCGAAT GGCAGGAAAC GCAACAGTTT
CACCGTTATC TACTTCAGTC CTGGATGGCG TGGAGCCATG AGATGGGGGA GATCAGCGCA
TCGGTTTTGC AACAGCAGGT GCAGGCCATT GCACAGTGGG CGTCTGCCGG GCACTGGTTT
ACCCGTAAAG CGTTGGCGCA GCTGCAACAG GATATTCGAC ATTGTTTTTC CGCTATCCCC
TTGCCGTTGA CACGTTTGGA CGAATTTGAA CGCTGTCGTG ACGCCTATCG CCTGTGCCAG
AGCTGGCTGG ATCGCGGGGA ACGTTTGCGT CAGCAAATCA ATCAGCGCTG GGCTGACGAT
ACCTTAGTGC AGCAACGAAC TTTTTTCGAA TCAGTAGAAT CTTCGCCGTT GAACGACAGC
CAGTCTCGGG CAGTGATCAA CGGTGAGGAT GCCGTATTGG TTTTGGCCGG TGCGGGCAGC
GGTAAAACGT CGGTGCTGGT GGCGAGGGCG GCATGGTTGC TGCGCAGCGC ACAGGCGCGG
CCAGAGCAAA TACTGTTGCT GGCGTTTGGC CGACAAGCAG CAGAAGAGAT GAATGGACGT
GTACGTGAGC GTTTGCATAC CGAAGATATT CAGGCCAAGA CTTTCCATGC CTTGGCGTTG
CACATCATCC AGCAGTGCAG CCGAAATGAG CCTGTCATTA GCCGGCTTGA AACTGATGCG
GAGGCTCGTC GTTCATTTCT GCTGCAACAG TGGCAGCAGC AATGCGCGGA AAAAAAGACG
CAGGCTAAAG GGTGGCGCCA GTGGCTATCG GACGAAATGG AATGGGTGTT GCCGGAGGGG
GATTATTGGC ATGATCCCGT TGTGTCGGCG CGGATGGCGG GGCGGCTGGA GCGTTGGTTG
GGATTAATGC GTATGCATGG CGGTACGCAG AGTGAGATGG TGGCGCAAGC GGATGAAGAG
GTGCGTACCG CAGTGCAACA GCGTCTGCGG TTGATGGCCC CCTTGTTGAA AGCCTGGAAG
AAGGCGTTGA AAGACGAAGG CGCCGTTGAT TTTTCCGGTT TGATCCATCA GGCAATCAAC
TACCTGGAAA AAGGGCGGTT CATCAACCCC TGGAAACATA TTCTGGTTGA TGAGTTCCAG
GATATTTCGC CGCAACGGGC ACAATTGTTG TCGGCGTTAA GACGACAGAA CAGCGGCACC
AGTCTGTTTG CCGTCGGCGA TGACTGGCAA GCTATCTACC GCTTCAGTGG TGCGGAACTT
TCTCTGACTA CCTCGTTTGA GCATCACTTT GGCATCGGCG CTCAATGCGT GTTGGATACG
ACGTACCGCT TCAACCGGCG TATCGGCGAG ATCGCCAATC AGTTTATTCA ACAGAATCCG
GCGCAATTGA AAAAATCCCT CAACAGCTTG CGGGATGGAG ACAGGCGTTC GGTTGCGCTA
TTGCCGGATG AGCAGCTTGA GGCGTTGCTG GATAAAATGA GTGGTTATGT CACGGGGCAG
GAGCGCATTC TGGTGTTGGC GCGTTACCAT CACTTGCGCC CTGATGTGTT GCAAAAAGCG
GATACCCGAT GGCCCAACCT GAACGTTGAT TTTATGACCA TTCACGCCAG CAAGGGGCGG
CAGGCGGATT ATGTGATCGT TGTCGGGCTG CATGAAGGGA GTGATGGTTT CCCCGCTCCT
GGCCGGGAAT CTCTGCTGGA AGAGATATTG TTGCCGGCCT TGGAGCCGTT TCCGGATGCG
GAAGAACGTC GGTTGCTGTA TGTGGCGCTT ACCCGGGCCA GACATCAGGT CTGGTTATTG
TATGACCGGG AGAAACCGTC GGTTTTTGTC GAACAGCTAC ATGGTTTGGG CGTGCCCAAA
CAACGTAAAC CGGGATGA
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| Protein sequence | MELKSTALGK HLAQHPYNRV ELLNAGVRVS GERHEYLIPF NQLQAIRCKK GLIWGELEFE
LPDGQVVRLH GTEWQETQQF HRYLLQSWMA WSHEMGEISA SVLQQQVQAI AQWASAGHWF
TRKALAQLQQ DIRHCFSAIP LPLTRLDEFE RCRDAYRLCQ SWLDRGERLR QQINQRWADD
TLVQQRTFFE SVESSPLNDS QSRAVINGED AVLVLAGAGS GKTSVLVARA AWLLRSAQAR
PEQILLLAFG RQAAEEMNGR VRERLHTEDI QAKTFHALAL HIIQQCSRNE PVISRLETDA
EARRSFLLQQ WQQQCAEKKT QAKGWRQWLS DEMEWVLPEG DYWHDPVVSA RMAGRLERWL
GLMRMHGGTQ SEMVAQADEE VRTAVQQRLR LMAPLLKAWK KALKDEGAVD FSGLIHQAIN
YLEKGRFINP WKHILVDEFQ DISPQRAQLL SALRRQNSGT SLFAVGDDWQ AIYRFSGAEL
SLTTSFEHHF GIGAQCVLDT TYRFNRRIGE IANQFIQQNP AQLKKSLNSL RDGDRRSVAL
LPDEQLEALL DKMSGYVTGQ ERILVLARYH HLRPDVLQKA DTRWPNLNVD FMTIHASKGR
QADYVIVVGL HEGSDGFPAP GRESLLEEIL LPALEPFPDA EERRLLYVAL TRARHQVWLL
YDREKPSVFV EQLHGLGVPK QRKPG
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