Gene Dd703_2684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2684 
Symbol 
ID8088370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3140406 
End bp3141209 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content40% 
IMG OID644836755 
ProductABC-2 type transporter 
Protein accessionYP_002988283 
Protein GI242240102 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.3362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTCGG TTATTTCAAT TGCTACATCA GATATTTTTG CTGCACTAAA AAAGTACAAG 
CTAGTATCTA TGCTTGGCTG GCAGGATGTT AAACAACGTT ATCGTAGATC TGCGCTAGGC
CCTTTCTGGA TAACGATAAG TATGGGCGTA ATGATTTCCG CGATAGGGGG AGTTTTTGGT
CGTATATTTA ATTCTCCCAT GTCTGATTTT TTGCCCTTCT TGGCTGCGGG TATGATCGTT
TGGACTTTAC TGTCTTCTGT TATTACTGAG GGCTGTTTCG GCTTTGTCAG CTCTGAAGCC
GTCATAAAAC AGCTGCCGAT TCCTTTATTT GTCCATATTC TCAAGGTTAT TTGGCGAAAT
ATTCTGATAT TTTTACACAA TATATTGATT ATTCCGCTTA TATTCATTTT CTTTTGTAAA
CTACCTAGTT TTTCGGCGTT TCTTTGTATC CCTGGGCTTT TCCTGTTGAT GCTGAATCTG
TCGTGGATTT CTCTGATTCT TGGCGTGATT TGCTCACGAT ACAGGGATTT GCCGCAAATC
GTTGCTAGTA TTTTACAAGT TGCTTATTTC TTGACGCCAA TAATGTGGAT GCCTAGTCAA
TTACCCAGAC ATTCTGATGT TTATACTTAT TTGCTTGATC TTAATCCGGC TTTTCACCTT
ATTGAGATTG TGCGGGCGCC ATTATTAGGA CAACTGCCAT CTATGACTAG TTGGTATACA
GCTATAGGAT TGGCTGTCGT TGGCTGGGGA ATAGCTATTG CTATTTTCGG CCGGTATAGA
AATCGTATTG CATACTGGTT ATAA
 
Protein sequence
MQSVISIATS DIFAALKKYK LVSMLGWQDV KQRYRRSALG PFWITISMGV MISAIGGVFG 
RIFNSPMSDF LPFLAAGMIV WTLLSSVITE GCFGFVSSEA VIKQLPIPLF VHILKVIWRN
ILIFLHNILI IPLIFIFFCK LPSFSAFLCI PGLFLLMLNL SWISLILGVI CSRYRDLPQI
VASILQVAYF LTPIMWMPSQ LPRHSDVYTY LLDLNPAFHL IEIVRAPLLG QLPSMTSWYT
AIGLAVVGWG IAIAIFGRYR NRIAYWL