Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2646 |
Symbol | |
ID | 8088332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3098449 |
End bp | 3099129 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644836717 |
Product | peptidase S14 ClpP |
Protein accession | YP_002988245 |
Protein GI | 242240064 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.113769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAG GGTGGTTACT TTTGCTCACG CTTTCCGCGT TTTCCGTCCA GGCCAGTCTT AAAGTCATCA GCACCCCCGG CGTTAAGGCC GAGGAGGTCG ACAGCGTCAA AATGTATTTC ACCGGCGCGG TTAACCAACA CAACATCACC GAGCTAACCA CCGCGCTGGA TGAGGCCAAC ATGCGGTTCA AAAACGCTCA GGCGATTTAT CTCTACATCA ACAGCAGAGG GGGAGAGATG GACAGCGGGC ATTCCGGTTA TCTGGCGATC CGCAGCTCCC GTATTCCCGT GACCACGGTC GATTTGTCCG TCGTGGGGTC GGCGGCGACC ATGCTGTTTT GCGGTGCGCA GAACCGGGTG ATGTTGAAAG ACACATTAAT CATGATTCAT GCCCCCAAAG TAGGTATCGG GGAAAAAGAG GCGGCGCCGG ACATGCTGGA TAGCCATCAT CAGTGGATGG ACAACTACGT CGGGATGTTG AAAAACATCT ACCGGGAGTG CACCTCGCTC AGCGATGACG AGCTGCGCCA GCGGCTCTAC AGCGAGGATA ACCACCTGTT TTTGAATAAC CAGGATGCAG AAAAAATCAA AATCAGCACA CGCACCGAGG ACAAAATTCG TGCGGCGGAG GTGGTTTACT TTATCGATGA CGATAATAGC TCGGCTAAAA ATCCATCCTA A
|
Protein sequence | MKKGWLLLLT LSAFSVQASL KVISTPGVKA EEVDSVKMYF TGAVNQHNIT ELTTALDEAN MRFKNAQAIY LYINSRGGEM DSGHSGYLAI RSSRIPVTTV DLSVVGSAAT MLFCGAQNRV MLKDTLIMIH APKVGIGEKE AAPDMLDSHH QWMDNYVGML KNIYRECTSL SDDELRQRLY SEDNHLFLNN QDAEKIKIST RTEDKIRAAE VVYFIDDDNS SAKNPS
|
| |