| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2428 |
|---|
| Symbol | |
|---|
| ID | 8086816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2847730 |
|---|
| End bp | 2848764 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644836501 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002988032 |
|---|
| Protein GI | 242239851 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTC TGGAACTTTT CGGTATCGGT AAATCGTTTG GCGCCACCCG CGTGCTGGAT
GCCATCGACC TGTACGTCGC GCCTGGGAGC CGGACGGTGG TCGTAGGGCC TTCCGGTTCC
GGCAAAACCA CGCTGCTGCG GATTATCGCC GGGTTCGACG CGCCGGATGA CGGCCGGCTT
CGGTTGCAGG GCCGCCTGCT GGCGGACGAC GCCGTCTGGG TGCCGGCGCA TGAGCGCGGC
ATCGGTTTTG TGCCGCAGGA TGGCGCGCTG TTTCCGCATT TTACCGTGGC GCAGAATATC
AGCTTTGGGC TTGGCGGCAG CCGCCGGGAG AAACAGCGTC GGGTCGATGA GCTGATGGAG
CGGGTTTCTC TTGATCGTCA ACTGGCATCT CTGTGGCCGC ACCAACTCTC CGGTGGCCAG
CAGCAGCGGG TGGCGCTGGC GCGGGCACTC TCACAACGGC CGGCGTTGAT GCTGTTGGAC
GAGCCGTTTT CCGCGCTGGA CACCGGGTTG CGCGCCGCCA TGCGTCAATC GGTCGCGGCG
CTGCTGGCGG AGTCGGACAT CGCGTCCATT CTGGTGACGC ACGATCAGGC GGAGGCATTG
TCGTTTGCCG ATCAAGTCGC GGTGATGCGA CAGGGGCGTC TGGTTCAGGT CGGTTCGCCG
CAGTCGCTCT ATCAACAGCC GGCCGATGAA GAAACGGCGG CGTTTCTCGG CGATACATTG
GTGGTGTCCG CCGAATTACA GAACGGCCTG GCGGCCTGTG TGCTGGGCGA TGTCCGCGTG
AGCGACCGCT TACGCCGTGG CCCGGCACGC ATCATGCTGC GGCCGGAACA GATAGACATT
ATGCCCGCGC CGCCGTTTAC GCAGCCTCAG GCGGTGGTGA CTGCCGTGGA TTTCGCCGGT
TTTGTGTCCA CGTTGCGTGT GAGGGTGGCG CACGGCCAGC AGGAAATCGA CATTAAAACC
CTCAGTCGCG AGGGCATCGG CGTGGGGACG CCGGTATGTC TGAATGTGGT GGGGCTGGCG
CATATTCTTG ATTGA
|
|---|
| Protein sequence | MNTLELFGIG KSFGATRVLD AIDLYVAPGS RTVVVGPSGS GKTTLLRIIA GFDAPDDGRL
RLQGRLLADD AVWVPAHERG IGFVPQDGAL FPHFTVAQNI SFGLGGSRRE KQRRVDELME
RVSLDRQLAS LWPHQLSGGQ QQRVALARAL SQRPALMLLD EPFSALDTGL RAAMRQSVAA
LLAESDIASI LVTHDQAEAL SFADQVAVMR QGRLVQVGSP QSLYQQPADE ETAAFLGDTL
VVSAELQNGL AACVLGDVRV SDRLRRGPAR IMLRPEQIDI MPAPPFTQPQ AVVTAVDFAG
FVSTLRVRVA HGQQEIDIKT LSREGIGVGT PVCLNVVGLA HILD
|
|---|
| |