Gene Dd703_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2396 
Symbol 
ID8086784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2811190 
End bp2813049 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content60% 
IMG OID644836469 
Productpeptidase M3A and M3B thimet/oligopeptidase F 
Protein accessionYP_002988000 
Protein GI242239819 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1164] Oligoendopeptidase F 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.953299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGG CTGTGGACTA TTTCAACGCC CTGAACCGCG ACTATCTGGC GGTTCACCGC 
GCCAAAGAGG ATCTGTTTTG GCAACGTTAT ATGGGAACCG GCGATGAAAC CGTACCGTCG
TGTTTTGCCG AAGCGGAGAG CAACTGGAAA GGTTTTATCG CCCGGCCGCA ACGGCTGGTG
GAATTACGCG AACACATCGC CAGCGTAGAA GCGGCGCCGA CAACGCCGGC GCAGCAGGCC
TTGCTGCATG GGTTGCGCGG CTGGTACCGC TTTTTCGACT GCAACGTGAT CGAGGATGAA
CAGGCGCAGA CATTGATGAA TGCGCTGGTC GCTGCGGAAA ACGATCTGTT TTCGCGCCGT
AAAACCTATC AGACCACCCA TATCAACGAG CACGGCGAAC GGGTGCCTGC GTCGCTCGGT
GAGTTGCTGA CCAACCAGAC CACCAACGAC AACGAAAGCT GGCGTCAGAG CTCCCAGCAG
GCGCTGCGCG AGCTGGAACA ATGGTTGCTG CGGCACGGCT TTCTGGAACT GGTGGCGTTG
CGTAACCGGT TTGCGCGACA GATGGGCTAT CGCAACTATT TTGACTACAA GGTGAACAAG
ACCGAGCGTA TGACGCCGGA ACAACTGTTC GCCATCCTCG ACCGGTTTGA GGAACAGACG
CGGGAGGCGA ACCAGCGCAG TCTGCAACAA CTGGCGACGG AAAAGGGCGC CGATGCGTTG
GCGCCCTGGA ATATCCGTTA TGCCAGCACC GGCGATGTGA CCCGTCAGCT CGATCCGTAC
TTCCCGTTTG AGGATTCGCT GACGCGCTGG GTCGACAGTT TCAAACGCCT GCATATCGAC
TTTGGCGGCG CCGAGTTGCA ACTCGACCTG CTGGTGCGTC CCGGCAAGTA TGAGAACGGT
TTTATGCATC AACCGGTGCC GCCGTTTATC GATCAGGGGC AGTGGCGACC GGCGCGCATC
AATTTCACCA GCCTGGCGCG GCCGGATCAG ATCGGTAGCG GCGCCAGGGG GTTGAATACG
CTGTTTCATG AAGGCGGCCA CGCCGCGCAT TTCGCCAATA TCCGCCAGAA CGCGCCCTGT
TTTGCTCAGG AGTTTCCGCC GACTTCCATG GCTTACGCCG AAACCCAGTC GATGTTCTGC
GACAGTCTGT TGCAGGATGC TGACTGGCTG AAACGTTATG CCCGCACCCG GCAGGGCGAG
CCGATACCGG ATGCGTTGAT TCAGGCGGAG ATCCGTACCC GCCAGCCGAT GCGGGCGTTC
GACGAGCGCC ATATTCTGCT GGTGCCCTAT TTCGAATGGC GGCTTTATAG CATGAGTGAC
GAGGCGCGCA CGCCGGAGGC GATTACCGCA TTGGCGCGTG ATATTGAGCA GCATATCCTG
GGGATCAGCG GCAGCCCGCG TCCGACGATA GCGATCCCGC ATTTGTTGTC GATGGAGTCG
GCCTGTTCGT ATCACGGCTA TCTGTTGGCG ATGATGGCGG TAGAGCAGAC GCGCCATTTC
TTCCTGCAGC GGGATGGGTA TCTGGCGGAT AACCCGGCGA TCGGCCCGGA TTTAACCCGT
CACTATTGGC AACCCGGTAA TAGCCTGACT CATGATGAGA CGCTGCGTAG CCTGACCGGC
GAAGGGTTCA ACCCGGATTA TCTGGCCCGC GAGTGCAATC TCACCGTGGA GGAAGCCTGG
CGGCAGGCAC AGGCGGTGAT GTCGGCGGCG GCGGCGCGTC CGCAGCCCGC GGCGGATTTC
CCTCTCAACG CCCGAATTCG AGTGGTGGAT GGTGATCAGG TGCTGGCGGA TAACCAACAG
GGCGATGAGG CCATGAGCCA CGACTTCGCG CGCTTTATCA ACCAGACTTA CCGCACCTGA
 
Protein sequence
MQQAVDYFNA LNRDYLAVHR AKEDLFWQRY MGTGDETVPS CFAEAESNWK GFIARPQRLV 
ELREHIASVE AAPTTPAQQA LLHGLRGWYR FFDCNVIEDE QAQTLMNALV AAENDLFSRR
KTYQTTHINE HGERVPASLG ELLTNQTTND NESWRQSSQQ ALRELEQWLL RHGFLELVAL
RNRFARQMGY RNYFDYKVNK TERMTPEQLF AILDRFEEQT REANQRSLQQ LATEKGADAL
APWNIRYAST GDVTRQLDPY FPFEDSLTRW VDSFKRLHID FGGAELQLDL LVRPGKYENG
FMHQPVPPFI DQGQWRPARI NFTSLARPDQ IGSGARGLNT LFHEGGHAAH FANIRQNAPC
FAQEFPPTSM AYAETQSMFC DSLLQDADWL KRYARTRQGE PIPDALIQAE IRTRQPMRAF
DERHILLVPY FEWRLYSMSD EARTPEAITA LARDIEQHIL GISGSPRPTI AIPHLLSMES
ACSYHGYLLA MMAVEQTRHF FLQRDGYLAD NPAIGPDLTR HYWQPGNSLT HDETLRSLTG
EGFNPDYLAR ECNLTVEEAW RQAQAVMSAA AARPQPAADF PLNARIRVVD GDQVLADNQQ
GDEAMSHDFA RFINQTYRT