| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2092 |
|---|
| Symbol | |
|---|
| ID | 8088259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2476677 |
|---|
| End bp | 2477585 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644836168 |
|---|
| Product | Baseplate J family protein |
|---|
| Protein accession | YP_002987701 |
|---|
| Protein GI | 242239520 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3948] Phage-related baseplate assembly protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATTA TCGACTTAAG CCAGTTACCC TCACCCAGCG TAGTTGAAAC GCTGGATTAT
GAAACGCTGT ACGACGAGCG CAAGAACACG CTGTTGTCGC TCTATGCCGA CGACGAGTTG
GAAGCGATAT CCCGCACGTT GTCACTGGAA TCGGAGCCGC TGACCAAACT GCTACAGGAA
AACGCCTATC GTGAATTGTT GCTACGCCAG CGCATCAACG AAGCGGCGCT TTCCGGCATG
TTGGCTTTCT CTCTCGGTAG CGACCTTGAC CAGTTGGGCG CCAATGTCAA CGTTTCACGT
CTCACGATTA CCGCAGCAGA TACAACTTCG GTTCCACCGA CCGACGCAGT CATGGAGTCC
GATACCGATT TTCGGTTACG CATCCAACAG GCATATGAGG GGTTAAGCGT AGCGGGCCCC
ATCGGTGCCT ATCAGTTTCA TGGCCGCAGT GCCGATGGAC GGGTCGCTGA TATTTCCGTC
ACCAGTCCCA GCCCGGCGCA AGTGCTGGTT TCCGTATTAT CGCGCGAAAA TGACGGGACG
GCCGACGACG ACCTGATCGC CATCGTCAAC GCCGCGCTGA ATGCCGAAGA TGTCCGTCCG
GTGGCGGATC GGGTTACGGT GCAATCCGCC AGAATAGTGA ACTACACCGT TGACGCCTCC
TTGTTCCTTT ATCCGGGCCC GGAAGCTGAA CCTATTCGCA CGGCGGCAGA GCAGAAACTG
CAAAGTTACA TCAGTACGCA ACATCGCTTA GGCCGTGACA TTCGCCGTTC AGCTATTTTC
GCAGCGCTGC ACGTTGAAGG GGTTCAGCGC GTGGAGCTTA CCCAGCCGGC TGCGGATATC
GTGCTTGATG ATACGCAGGC ATCATATTGC ACCCAATATA CGCTGACGGT GGGAGGTACG
GATGAGTAA
|
|---|
| Protein sequence | MPIIDLSQLP SPSVVETLDY ETLYDERKNT LLSLYADDEL EAISRTLSLE SEPLTKLLQE
NAYRELLLRQ RINEAALSGM LAFSLGSDLD QLGANVNVSR LTITAADTTS VPPTDAVMES
DTDFRLRIQQ AYEGLSVAGP IGAYQFHGRS ADGRVADISV TSPSPAQVLV SVLSRENDGT
ADDDLIAIVN AALNAEDVRP VADRVTVQSA RIVNYTVDAS LFLYPGPEAE PIRTAAEQKL
QSYISTQHRL GRDIRRSAIF AALHVEGVQR VELTQPAADI VLDDTQASYC TQYTLTVGGT
DE
|
|---|
| |