| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1597 |
|---|
| Symbol | |
|---|
| ID | 8090191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1884213 |
|---|
| End bp | 1884776 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644835681 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002987217 |
|---|
| Protein GI | 242239036 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0577868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGAC CGTTGAGCGA GGAAAAACAA GACGCCATCC TGGAGGCGGC AACGACGCTG
ATTGCCGCCA ACGGTGTGGG GGCATCGACG GCGGCGATTG CGAAGATGGC GAAGGTCGCC
GAAGGCACGC TGTTTACCTA CTTTACCAAC AAGGATGTGT TGTTGAATCA GCTGTACCTG
CGGCTGTCCG AGCATTTGGC GGAGTCCCTG GCGTATGTGC CTGCCAATGA TCCTCGCGAA
GTGGTCACGC ACATTCTCGG GCAGTTGATC GCGTGGGGTG TCCAAAACCC AGCCAGGTAC
CAGGCGAAGA ACCAGCTCAA GGTCTCGGAG CGCATCACGC CGGCAACCCG TGCTCAGGGG
GCGCAGTTGT TTCGGGAATC GCATCAGCGG TTGCTCCATA TTCTTGAAGG ACGTATAGAA
CCTGATCTTG CGTCGTTCTA TGTGGTGACG GTGCTGCCAG GCTTGGCGGA TGTGGCCATC
GAGGCCATTG CCGCGCAGCC ACAGCAGCAA GCACGGTTGA CACAGGCCAG CATCGATCTG
TGGTGGAAGG GCGTGAAGCC GTGA
|
|---|
| Protein sequence | MARPLSEEKQ DAILEAATTL IAANGVGAST AAIAKMAKVA EGTLFTYFTN KDVLLNQLYL
RLSEHLAESL AYVPANDPRE VVTHILGQLI AWGVQNPARY QAKNQLKVSE RITPATRAQG
AQLFRESHQR LLHILEGRIE PDLASFYVVT VLPGLADVAI EAIAAQPQQQ ARLTQASIDL
WWKGVKP
|
|---|
| |