| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1441 |
|---|
| Symbol | |
|---|
| ID | 8088166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1709234 |
|---|
| End bp | 1710118 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644835522 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_002987064 |
|---|
| Protein GI | 242238883 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.681531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAAT TTAGTGGGGT TTTCCCTTAT CTGGTTTCAC CGGTGAAAAC GGATGGCGAG
GTCGATAAGG CCGTGCTGAC CGAGCTGGTC GAGCATTTGA TCGCCAGCGG TGTTCATGGG
TTGACTCCGT TGGGAAGCAC TGGTGAATTC GCCTATCTCA ATGCCCGGCA ACGTTTTGAT
ATTGTCAGTA CCGTGGTTAC TGCCGCCAGG GGCCGGGTTC CGGTCATTGC CGGCGTAGCC
GCTACCACTA TTCAGGATGC CGTGGCCCAG ACGGAAGCGT TTGTCCAACT GGGCGTCGAC
GGCATCCTGG CTATTCTTGA AGCCTATTTC CCTATTGCCG ATGACGGCGT GGAAGCTTAC
TTTCGCGCTA TCGCCGCCGC CGCCCAAACC AAACCGGTGG TGCTGTACAC CAATCCCCAG
TTTCAACGTT CGGACTTGAG CCTGCCAGTG ATTGAACGGC TCAGTCATGT GACGAATATT
AACTACATCA AGGACGCCTC GACCAATACC GGCCGTCTGC TGTCAATCAT TGAACGCACG
CAGGGACGGA TGAGCGTCTT CGCTGCGTCT GCGCATATTC CTGCCTGTGT GATGTTGATA
GGCGGCGTCG GATGGATGGC CGGCCCGGCC TGCATCGTAC CGAAACAGAG CCTGGCGCTG
TATGAGGCGG CCCGGCGCGG TGATTGGTCG CAGGCGATGA CGCTGCAGCG GCCGCTATGG
CGCGTCAACG AAATTTTTGC CCGTTATTCG GTGGCGGCCT GCATCAAAGC CGCGCTACAA
CTGCAAGGAT TTGCGGTCGG CGATCCGCTC CCGCCGCAAA AACCGTTGGC GGGAGCCGCG
CTGGAGGAGA TCGCTGACGT CTTGCGTTCG GTTGGCGCGT TATGA
|
|---|
| Protein sequence | MVEFSGVFPY LVSPVKTDGE VDKAVLTELV EHLIASGVHG LTPLGSTGEF AYLNARQRFD
IVSTVVTAAR GRVPVIAGVA ATTIQDAVAQ TEAFVQLGVD GILAILEAYF PIADDGVEAY
FRAIAAAAQT KPVVLYTNPQ FQRSDLSLPV IERLSHVTNI NYIKDASTNT GRLLSIIERT
QGRMSVFAAS AHIPACVMLI GGVGWMAGPA CIVPKQSLAL YEAARRGDWS QAMTLQRPLW
RVNEIFARYS VAACIKAALQ LQGFAVGDPL PPQKPLAGAA LEEIADVLRS VGAL
|
|---|
| |