| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1375 |
|---|
| Symbol | |
|---|
| ID | 8087937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1575879 |
|---|
| End bp | 1576523 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644835456 |
|---|
| Product | 3-oxoacid CoA-transferase |
|---|
| Protein accession | YP_002986999 |
|---|
| Protein GI | 242238818 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.375962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAC GTAACCGTAT TGCCCGCCGC GCGGCGGAAT ACTTCTCGGC GGGGGATGTC
GTCAATCTGG GCATCGGCAT CCCCAGCCTG TGCAGCGACT ATGCCGAACC CGGCGTGATG
TTCCATACCG AAAACGGATT GGTCGGCATG GGGCCGCTGG CGTCCGGCAT ACAGGCGGTG
GAAGGGTTTT CCAACGCGAC GGCCATGCGC TTTGTGCCGG TGCCGGGGGC CAGCGCGTTC
GACAGCGCCG AATCCTTCGC GCTGGTGCGT TCCGGCAAGC TGGCGGCGTC GGTGCTGGGC
GGGTTGCAGG TATCGGCAAC CGGCGATCTG GCCAACTGGG CGCAGCCCGG CCGGGTGTTC
GGCATGGGCG GCGCGATGGA TCTGGTTAAC GGCGCGCGCA AGGTCATCAT CACCATGGAA
CTCTGTACCC GCGACGGCCA GCCGAAAATC GTCAATACCT GCAGCTATCC GTTGACCGGG
CAGCGTTGTG TCGACCACAT CGTGACGGAA CAGTGCGTCA TCGATGTCAC GCGCGACGGC
CTGATGTTGG TGGAACTGCT GGAGGGGCTG ACGCCTGACG ACATTCAGCG CCAGGTGGAG
CCGCGTTTGC TGATTTCCAG CCGGTTGAAA ACCCTACAAC CCTGA
|
|---|
| Protein sequence | MNPRNRIARR AAEYFSAGDV VNLGIGIPSL CSDYAEPGVM FHTENGLVGM GPLASGIQAV
EGFSNATAMR FVPVPGASAF DSAESFALVR SGKLAASVLG GLQVSATGDL ANWAQPGRVF
GMGGAMDLVN GARKVIITME LCTRDGQPKI VNTCSYPLTG QRCVDHIVTE QCVIDVTRDG
LMLVELLEGL TPDDIQRQVE PRLLISSRLK TLQP
|
|---|
| |