Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1341 |
Symbol | |
ID | 8087903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 1532490 |
End bp | 1533299 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644835422 |
Product | NLPA lipoprotein |
Protein accession | YP_002986965 |
Protein GI | 242238784 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0143755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATTC GTTTCGCTCT TTCGCTGAGC GCAGTGACGT TATCCGCCGG GCTGGCCCTC TCCGCTCAGG CCGCAGAAGC CCTGCGTGTC GCCGCTGACC CGGTGCCGCA CGCGGAAATT CTGGCCCAGG TGCAAAAGCA GGACCCGGCG CTGAAACTGA AAGTGGTCGA GCTCAGCGGT AACGTCAATG CCAACGAACT GCTGGCCCAT GGCGATGTCG ACGCCAACTA TTTCCAGCAT GTGCCTTATC TGCGCGATCA GGAAAAGGCG CTGGGCCGGA AGTTCGTGGT GGCGGCCACC GTGCATATTG AACCGCTGGG TATTTACTCA AGAAAGATCA AATCGTTGAA GGAGGTAAAA GACAACGCCA CCGTGGCGGT GCCGAACAAT GTGACCAACC TGAGCCGGGC GCTTTACCTG CTGCAGGAGC AGGGGCTGAT TACACTGAAA GCCGGTTATA ACGATCCGTC GAAGGATCAG GCTACGCCGA AGGAGATTGC GGAAAACCCG CATCATCTGA AGATCAAGGA AATCGAGGCG CCGCAGCTGC CGCGTTCGCT GGATGATGTG GATCTGGCGA TCATCAACGG CAACTACGCG CTGGAAGCCG GTCTGGTGCC CTCGAAGGAT GCGCTGGGGC TGGAGAGCGC CACCCATAAT CCCTACGCCA ATATCCTGGT GACGACGCCG GAACTGCAAA ATGACCCGCG CATCAAGCAG TTGGCCAGGG ATTTGGAATC TAAGGCGACG GCCGATTTCA TCCGTAGCAC GTACCAAGGC TCGGTGATCC CGGTGGCGGG ACAGAAATAA
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Protein sequence | MRIRFALSLS AVTLSAGLAL SAQAAEALRV AADPVPHAEI LAQVQKQDPA LKLKVVELSG NVNANELLAH GDVDANYFQH VPYLRDQEKA LGRKFVVAAT VHIEPLGIYS RKIKSLKEVK DNATVAVPNN VTNLSRALYL LQEQGLITLK AGYNDPSKDQ ATPKEIAENP HHLKIKEIEA PQLPRSLDDV DLAIINGNYA LEAGLVPSKD ALGLESATHN PYANILVTTP ELQNDPRIKQ LARDLESKAT ADFIRSTYQG SVIPVAGQK
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