Gene Dd703_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1281 
Symbol 
ID8087843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1463737 
End bp1465353 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content63% 
IMG OID644835362 
Producthydrogenase 4 subunit F 
Protein accessionYP_002986905 
Protein GI242238724 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0834276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACAC TGGATCTGTT TATCACCCTG CTCGCCACCC CGCTGGTGGT GGCGCTGCTG 
GCCTTCGTCA GCCGCTTTAC CGGCGGCGCC GCACGCACCC TGGTGACGGC TGTCCACCTG
GTGGGCATCG TCGCGTTGCT GGCGATAACG TTGTTCACTG TCTGGAGCGT TTACCAACAG
GGCGAACTGT TGGCGGCCAA CCGCTGGCTG CATCTGGATA GCCTGAGCGC GCTGTTCCTG
GCGATCCTCG GCGTCATCGG TTTTATCACC GGGCTCTACT CCATCGGTTA TATGCGCCAT
GAGCTGGATG GCGGCGAGAT CAGCCTCCCG ACGCTGTGTT ACTACTACGG CTTCTTCCAC
CTGTTCCTGT TCACCATGTT GTTGGTGATC ACCAGTAATA ACCTGATCCT GATGTGGGCA
GCGATTGAAG CCACCACGCT GAGCTCCGCG TTTCTGGTCG GGCTGTACGG ACAGCGCTCT
TCGCTGGAGG CGGCCTGGAA ATACATCATC ATCTGTACCG TCGGCGTGGC CTTCGGTCTG
TACGGTACGG TGCTGGTGTA CGCCAACGCC GCCAACGTGA TGACCGAACC GGGCAACGCC
ATTTTCTGGA CGGAAGTGCT GAAACACGCC GGCGAGCTGG ACGGCACACT GATGCATCTG
GCGTTTATCT TTATCCTCAT CGGCTTCGGC ACCAAAACCG GGTTGTTCCC GATGCATGCC
TGGTTGCCGG ATGCCCACAG TGAAGCCCCC AGCCCCACCA GCGCCATGCT TTCCGCCGTA
CTGCTCAACT GTGCGCTGCT GGTGATCGTG CGTTACACCA TTCTGATCAG CGCCGCCATC
GGGCCGGAAT TTCCGCAACG GTTGTTGCTG GTGTTCGGCC TGCTGTCGGT GGCCGTGGCC
GCGTTCCTGA TCCTGGTGCA ACGGGATATG AAGCGCCTGC TGGCCTACTC CAGCGTGGAA
AACATGGGGT TGATTGCCGT GGCGATCGGC ATCGGCGGGC CGCTCGGCAT TCTGGCGGCG
CTGCTGCACA CCCTCAACCA TAGTCTGGCG AAAACCCTGC TGTTCTGCGG TTCCGGTAAC
GTGCTGCTGA AATATGGCAC CCGCGATATG GATGCGGTGA AAGGTATTCT GCGCGTGGCG
CCGCTGACCG GCGCACTGCT GGCGGGCGGC GCGCTGGCGC TGGGCGGCAT GCCGCCGTTC
AACGTGTTCC TCAGCGAGTT CATGACCGTT ACCGCCGGGA TCCACGCCGG GCAGCTACCG
CTCACACTGC TGCTGCTGGC GTTGTTGACC GTGGTGCTGG CCGGGCTGGT GCGCATGGTG
GCGATGACCG TCCTTGGCAG CAAGCCAGAG GCGGTCAGCC GCGGCGAACT GGGCTGGCTG
ACCACCGTTC CCATGCTGAT CCTGTTGGTG CTGATGCTGG TGATGGGCAC CCGCATCCCG
CAGCCGGTGA CGCAACTGCT GGAGCGAGCC ACCGCCATCG TGCTTAACAC CGCGCCGGGC
GCCGACGGCC AAGCGGCCCC GCTCGGCTGG CCGTCGCTGA GCCTGCGCGC GGCCCCTCAG
GAACATGCGC CCGTTTCATC GTTAACCCCT TCCCGTCAGG AGATGTACCG TGATTAA
 
Protein sequence
MATLDLFITL LATPLVVALL AFVSRFTGGA ARTLVTAVHL VGIVALLAIT LFTVWSVYQQ 
GELLAANRWL HLDSLSALFL AILGVIGFIT GLYSIGYMRH ELDGGEISLP TLCYYYGFFH
LFLFTMLLVI TSNNLILMWA AIEATTLSSA FLVGLYGQRS SLEAAWKYII ICTVGVAFGL
YGTVLVYANA ANVMTEPGNA IFWTEVLKHA GELDGTLMHL AFIFILIGFG TKTGLFPMHA
WLPDAHSEAP SPTSAMLSAV LLNCALLVIV RYTILISAAI GPEFPQRLLL VFGLLSVAVA
AFLILVQRDM KRLLAYSSVE NMGLIAVAIG IGGPLGILAA LLHTLNHSLA KTLLFCGSGN
VLLKYGTRDM DAVKGILRVA PLTGALLAGG ALALGGMPPF NVFLSEFMTV TAGIHAGQLP
LTLLLLALLT VVLAGLVRMV AMTVLGSKPE AVSRGELGWL TTVPMLILLV LMLVMGTRIP
QPVTQLLERA TAIVLNTAPG ADGQAAPLGW PSLSLRAAPQ EHAPVSSLTP SRQEMYRD