| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1262 |
|---|
| Symbol | lacI |
|---|
| ID | 8087824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1442727 |
|---|
| End bp | 1443800 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644835343 |
|---|
| Product | lac repressor |
|---|
| Protein accession | YP_002986886 |
|---|
| Protein GI | 242238705 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000349798 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGA AACCCGTAAC CTTGAACGAA GTGGCCGCCT ATGCCGGGGT TTCGTACCAG
ACCGTATCCC GCGTACTGAA CCGCTCGCCC CAGGTTTCTC CCGCGACCAA AGCGAAGGTC
GAGCAGGCCA TGGCGGCGCT CAACTATATT CCCAACCGCG TCGCCCAACA GTTGGCGCGT
CGGCGCCCCA CCACCATCGG GCTGGCGACT ATCGATCTGT CGCTGCATGC GCCGTCTCAA
ATCGCGGCCG CCATCAAAAC CACCGCCAGC GCACAGGGGT TCAACGTGGT GGTCGCCATG
CTCAGTGCCG CCGACGGGTA TGACGCCCGG CGCGCCGTCA GCGAGCTGCT GGCGCAACGG
GTCGACGGGA TTATCGTCAA CGTCCCGCAG GAGCCGGCAA TGGCCGAACC GCTCAGCCAG
CTTTGTGCGA CGACGCCGGT GTTGTTTCTG GATACTCAAC CCGATACCCC CTGGCCCCGC
GTTATGTTCG ATCCGCTCCA AGGGGCGAGG CTGGCGATTG AGCATCTGGT CACGCGGGAG
CATCGCCGGA TCGCGCTGCT GACCGGCCCG CTCAGCGCCG TTTCCGCCCG CTTGCGTTAC
GAAGGCTGGC TGCAAGGCTT ACGCGATCAT CAGCTCTCGC CCTGCGCCGT TGCCGAAGGC
GACTGGAGCG CACAGTCCGG TTATCGTTGC ACGCCACAAC TCTTGATGGC ATCGCCCCAA
CCGAGCGCCA TCGTGGTCGC CAACGATCAG ATGGCGCTCG GCGTGCTGCG GGCGTTGCAC
GAATATGGAT TAAGCGTACC GGATCAGATC TCGGTTATCG GATTTGACGA TACCCAGGAC
AGCGCGTATT ACCAGCCGCC GCTGACCACC ATTCGGCAGG ATTTCCGCCA ATTAGGCCAC
GAAGCCGTGC TGCATCTGGT CGCCCGTCTG CTGGCGCAGG AGCCGGCTGC CTCTCTGTTG
TTGGAAACCG TGCTGGTGGA ACGACAGACC ACGGCGCACT ATGCATCAAA GACCCCAGAC
GCTCAGGCCA TCGCTCATCA ATTGATCGCG CTCGCACGGC GGTTGCAAGG ATAA
|
|---|
| Protein sequence | MKTKPVTLNE VAAYAGVSYQ TVSRVLNRSP QVSPATKAKV EQAMAALNYI PNRVAQQLAR
RRPTTIGLAT IDLSLHAPSQ IAAAIKTTAS AQGFNVVVAM LSAADGYDAR RAVSELLAQR
VDGIIVNVPQ EPAMAEPLSQ LCATTPVLFL DTQPDTPWPR VMFDPLQGAR LAIEHLVTRE
HRRIALLTGP LSAVSARLRY EGWLQGLRDH QLSPCAVAEG DWSAQSGYRC TPQLLMASPQ
PSAIVVANDQ MALGVLRALH EYGLSVPDQI SVIGFDDTQD SAYYQPPLTT IRQDFRQLGH
EAVLHLVARL LAQEPAASLL LETVLVERQT TAHYASKTPD AQAIAHQLIA LARRLQG
|
|---|
| |