Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1235 |
Symbol | |
ID | 8087796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 1418951 |
End bp | 1419799 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644835317 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002986861 |
Protein GI | 242238680 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.593995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCTT TATCCGCACC GGCGCCGATG CCCGCGCCGG CGCCGTTCTC ACTGCCGCGT TCGGTCTATT TCCGGACTTA CCCGTTGACG AAAGGAACGC AGGTGGCGCA GCACCAGCAC CCGTTTGTCG AGTTTCTGTA TGCGCGCGAA GGCGGTATGC GTATGGAGAT TGAAGGGAAG ACGCTGATCG TGCCGGTGCT TTACGGCGTC TGGATCCCGG CCAATGTGCC GCACCAGATT CTGGCGACCA GCAATGTACT GCTGGAGAGT CTGTATGTTG AACCGGAGTA TGCCGCGATT GACCATGACA GCAGCAAGGT GGTGGTGATC AGCGATTTCG TGCGGGAATT TATCCACTAC GCGACGGAGC ATATACCTGA ACAATACGAT GAGGCCGGGG ATGACGGCAA AATGGTCGAT GTGCTGACGA CGTTGTTGCG ACAGTTACCC GACGCCGGTT TCTCGCTACC GTGGCCGGAG TCCGTCGTGT TGGTGCGGGT CTGCCGCGAT ATTCAGCAAG CGCCGGATGC CGCGCACGGT ATTGAGGCGT GGGCGGCCCG TACCGGGATG TCGGTACGGA CTTTTTCCCG CCGTTTCAGG AAGGAAACCG GCGTGTCGTT CAGCGAATGG AAGAAGCGTC TGCGGCTGTT GGAGTCGATC ATCATGTTGA AAGATAACCG CAGCGTCACT CAGGTGGCGC TGGATCTCGG TTATTCCAGC ACCGCGTCGT TTACCTTTGC CTTCCGCCAG ATGTTCGGCG TACCGCCGAC GCGCTATCAG TCCGCAGCCC ACCAGAGTGC GACTAGCCCG CCACCGCCAG CAACAGCGGG AACAGCAACG GCGCGATAA
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Protein sequence | MPSLSAPAPM PAPAPFSLPR SVYFRTYPLT KGTQVAQHQH PFVEFLYARE GGMRMEIEGK TLIVPVLYGV WIPANVPHQI LATSNVLLES LYVEPEYAAI DHDSSKVVVI SDFVREFIHY ATEHIPEQYD EAGDDGKMVD VLTTLLRQLP DAGFSLPWPE SVVLVRVCRD IQQAPDAAHG IEAWAARTGM SVRTFSRRFR KETGVSFSEW KKRLRLLESI IMLKDNRSVT QVALDLGYSS TASFTFAFRQ MFGVPPTRYQ SAAHQSATSP PPPATAGTAT AR
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