Gene Dd703_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1216 
Symbol 
ID8087777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1392350 
End bp1393510 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content57% 
IMG OID644835298 
Productamidohydrolase 
Protein accessionYP_002986842 
Protein GI242238661 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATTC CTCCGGCGTT GCTGGAACAG GCCGTCAGGT GGCGGCGTCA ACTGCATTCC 
TGTCCTGAAC TCGGCTATCA GGAACATCAA ACATCACGCA TGGTGGCGGA ATTACTGACG
AGCTTCGGTT TACAGGTGCA TACCGGGTTA GCGGGTACTG GCGTCGTTGG CACGCTGAAA
AATGGCGACG GGCCAGCCAT AGGGTTGCGT GCGGATATGG ACGCCCTGCC CGTGACGGAA
CGGGGGCATT GCGAACATAA ATCCCTGCAT GATGGCGTGA TGCATGCCTG CGGACACGAT
GGTCATACCG CCATTCTGCT GGCAACCGCG CGTCATCTTG GTCAACAGCC TCATTTCAAC
GGTACGGTGC ATTTCGTTTT TCAACCCGCT GAAGAAAATC TGGGCGGCGC CCGTCGGATG
GTGGAAGACG GGTTATTCCA GCATTTCCCG ATGGAAAGTA TCTACGCGCT GCATAACTGG
CCGGGGCTGC CCGCCGGGCA TGTCGGCGTG AGCGAAGGGG CGATAATGGC GTCGCTGGAT
TCTTTTGAAA TCGAGCTGAC CGGGAAGAGT TGTCATGCCG CTATGCCGGA AAGCGGCGCG
GATCCTATCG TCGCCGCATC GCAACTGGTG CTGTCGCTGC AAACCATTAC CTCCCGATGT
TTGTCGCCGC AATCCTCGGC GGTGGTCAGC GTGACGCAGA TTATCGGCGG TGAAGCTATC
AATGTTATTC CTGAAAAAGT GATCTTGCGC GGTACGCTCC GATGCCTGCA GGCCGACGTG
CGGGAGCGGG TAAAAACCCT GATCGATCAG TTCGTCGCTC AGTTGCCGGT GGTGTTTGGC
GTCAGGGGGG AAATCCGCTA TTTCCCCGGT TATCCGGTCA CGATGAATAC CCCATCCGCC
GCACTGGCCG TCAGTGATGT CGCCCGGGCG CTTCTGGGCG ATGATCGCGT ACATTGGCAG
GTTAAACCTT CAATGGCATC GGAGGATTTT GCCTGCATGC TGGAGCATTG TCCTGGCGCC
TATTTCTGGT TGGGGGCTGA TGGTCTGGCG CCTTCCCGTC CTTTGCATAA CGCATTCTAT
GATTTCAATG ATGAACTGCT CGAAACAGGC GTTCAGTTAT GGAGTGCATT GGTGGCGCGT
TTGTTGCCCA TTTCACTGTA A
 
Protein sequence
MSIPPALLEQ AVRWRRQLHS CPELGYQEHQ TSRMVAELLT SFGLQVHTGL AGTGVVGTLK 
NGDGPAIGLR ADMDALPVTE RGHCEHKSLH DGVMHACGHD GHTAILLATA RHLGQQPHFN
GTVHFVFQPA EENLGGARRM VEDGLFQHFP MESIYALHNW PGLPAGHVGV SEGAIMASLD
SFEIELTGKS CHAAMPESGA DPIVAASQLV LSLQTITSRC LSPQSSAVVS VTQIIGGEAI
NVIPEKVILR GTLRCLQADV RERVKTLIDQ FVAQLPVVFG VRGEIRYFPG YPVTMNTPSA
ALAVSDVARA LLGDDRVHWQ VKPSMASEDF ACMLEHCPGA YFWLGADGLA PSRPLHNAFY
DFNDELLETG VQLWSALVAR LLPISL