| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1184 |
|---|
| Symbol | |
|---|
| ID | 8087745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1352520 |
|---|
| End bp | 1353524 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644835266 |
|---|
| Product | ornithine cyclodeaminase/mu-crystallin |
|---|
| Protein accession | YP_002986810 |
|---|
| Protein GI | 242238629 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0433932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCGC CGTTACGCGT TCTGAATCAG GCCCAGGTAC GCGCACTGGG CGGCGAAGAC
CCGCAGCAGG CGTTTCTCGA CGTGGTGGAT ACCGTACATC TGCTGCGTCA GGGAGCGGCG
AGTATGCCGG CGGAAACCCA CGTCGGGTTA GACACGCCCG GGGGAAAAGT CTATGCCCTG
CCCGCTCGCG TCGGCGGCCG ATTCAACAGC ACCGGGGTGA AATGGACCGC GCATCGCCCC
GACGCCGGCG ATGGTTTCCC CATGGCGATG ACGCTGACGC TGCTCAACCG GGCGGACAAC
GGCGTCCCCG TCGGGTTGTT GGAGAGCGGT GGTCTGACTG CGGCCCGTAC CGCCGCCGTA
TCGGCGGTAG CGCTGCATTA CGCCGCGCCC AGGCCGGTGG AACGGGTATT GCTGCTGGGC
GCCGGCATGC AGGCCCGCGC CCACCTCACC ATGCTGCAAA CCTTGTTCCC GCATCTCGCC
CAAGTCACCT GCTGGAATCG TACCCCCGCG CACTTAACGC AGATGTTGGT CAACGCCGAA
CGCTCCCCTT GGCCCATCGT CGCCAAAACC ACACTGCAGG ACGCCCTGCG ACACCCCTAC
GATGCGCTAA TCAGTTGCAC CGGCAGCCCG ACGCCCATAC TGGCGCCCGA CGCGATGCGC
GATGGCACGC TGCTGATCCA GGCGGGCTAC CACGAAGCCG CGTTTGATAC CATCCGGCAT
GCCACGCAGG TCGTAGTGGA TGCCTGGGGC GATTTCTGCC ACACCAGCGC CAAAAGCTTG
TTTCAAATGT TCCGCGCCGG CCAGTTCGCC GAACGCCAGG TCGCCGCCGA TCTGACGCAG
CTGATTGTGG ATGGCTGGCG GGCGACGCCG GACGATCGGG TCTACTTTTC GTCGTTCGGA
CTCAACGTGT TCGATATCGC GCTGGCGGCA CGGGTGTTGC AACAAGCCGC CGTCAGCAAC
ACCGGTACAG CGTTGCCGCT GTTTACAGGA TCCCCGTTAT GCTGA
|
|---|
| Protein sequence | MSAPLRVLNQ AQVRALGGED PQQAFLDVVD TVHLLRQGAA SMPAETHVGL DTPGGKVYAL
PARVGGRFNS TGVKWTAHRP DAGDGFPMAM TLTLLNRADN GVPVGLLESG GLTAARTAAV
SAVALHYAAP RPVERVLLLG AGMQARAHLT MLQTLFPHLA QVTCWNRTPA HLTQMLVNAE
RSPWPIVAKT TLQDALRHPY DALISCTGSP TPILAPDAMR DGTLLIQAGY HEAAFDTIRH
ATQVVVDAWG DFCHTSAKSL FQMFRAGQFA ERQVAADLTQ LIVDGWRATP DDRVYFSSFG
LNVFDIALAA RVLQQAAVSN TGTALPLFTG SPLC
|
|---|
| |