Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1058 |
Symbol | |
ID | 8087613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 1217638 |
End bp | 1218750 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644835134 |
Product | periplasmic binding protein |
Protein accession | YP_002986685 |
Protein GI | 242238504 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.530502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTCA TCATTACCTT TTTTACCTTG TTGTTTTTTA GTGCGCTGAC CCACGCCAAA ATCGTCACGG ATATGCAGGG CCGTCAGGTT GCTATTCCGG ATAACCCGCA GCGCATCATT CTGGGCGAAA GCCGCATGCT GTATACGCTG GCGCTGCTGG AACCCGGTAA TCCGGCGCAA CGCATTGTGG GGTGGCCTGG CGATCTGGCG CGCTACGATG CGCAAAGCTG GGGGCGTTAC GTCGCCAAAT ATCCCGACAT CGCCCACATC CCGCAATTGG GAAACGGCAA TCTGAACACC GTTAATGCAG AAACGTTGCT GCCGCTGAAA CCGGATCTGG TGATCCTGCC GCGATTGGCG AAAGGCTCCG ACAATGAGCA GGGTATTCAG CAGGCGCTGA CCCAAGCAGG TATTCCGTTT ATCTATGTCG ACCTGCGCAT CGATCTGCTG AAAAACACCG TCCCCAGCCT GAAACTGCTG GGCGAGGTGC TCAATCGGCA AACGCGCGCC GACGCTTTTA TCCAGTTCTA CCAGCAACAT ATGGATACCG TGCGCCAGCG GCTCAGCCAA CATCAGGGGC GCAAGACCAG GGTGATGCTG CATCTGCATC TTGGCCGTCG GGACACCTGC TGCACCACCG CGGTCAACGG TAATCTGGGC GAACTACTGG CTTTCGCCGG CGGCGACAAC ATTGCTGCGG GTTCGGTGCG CGGCGTTTAT GGCGAACTGA GCCCCGAACA AGCGCTGGCC GCCCGCCCGG ACGTCTACAT CGCCACCGGC ATGGCCGGGC CGGAGGGCAA GCGCCTGTCG GATCTGATGC TCGGCCCGGA TGTTTCACCC CAGCAGGCAC AGGACAGCTT CTCCACGCTG CTTCGTCAGG AACCGCTGCT GTCGCACCTT TCCGCCGTCA ATACCGGCCG TGCCTGGAGC ATGTGGCACA ACTTCTATCT CAGCCCTTAT CACGTAGTGA TGGTGGAGAT GTTCGCCAAA GCGCTCTACC CGGAGTTATT CCGCGATCTG GATCCGCAAC TGACGCTGCA ACAGATTTAT CAGCAATTTT TATCCATTGA TTTTTCAGGG ACCTATTGGA GTCAACTCAC ACATGAACAA TAA
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Protein sequence | MRVIITFFTL LFFSALTHAK IVTDMQGRQV AIPDNPQRII LGESRMLYTL ALLEPGNPAQ RIVGWPGDLA RYDAQSWGRY VAKYPDIAHI PQLGNGNLNT VNAETLLPLK PDLVILPRLA KGSDNEQGIQ QALTQAGIPF IYVDLRIDLL KNTVPSLKLL GEVLNRQTRA DAFIQFYQQH MDTVRQRLSQ HQGRKTRVML HLHLGRRDTC CTTAVNGNLG ELLAFAGGDN IAAGSVRGVY GELSPEQALA ARPDVYIATG MAGPEGKRLS DLMLGPDVSP QQAQDSFSTL LRQEPLLSHL SAVNTGRAWS MWHNFYLSPY HVVMVEMFAK ALYPELFRDL DPQLTLQQIY QQFLSIDFSG TYWSQLTHEQ
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