| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0986 |
|---|
| Symbol | |
|---|
| ID | 8088103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1127997 |
|---|
| End bp | 1128836 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644835059 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002986614 |
|---|
| Protein GI | 242238433 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.949887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACG AATACATCAT ACCGTTGCCC GCCGGGGCTG AGCCGGTGCC GTTTTATGCG
CCGATGAGCG AGGCGTTTTC CCATCAAGTC GTGGCGCGTC GCCAATACCT GCTGCGCACG
GTGGTCATGC GTGCCGACCT GATTGGGTTG GTGGTGTCCG GTAATAAACA ACTCGTCACC
CCGGAAGGCG GCAATGTGTT TGTCCCCGGC GAATTGTTTG TGCTGCCGCG CGGCACCCAG
TGGGATGTGA TTAACGATCC CGCTCCGCAG GGAAACTATG TGGCGCGGAT CCTGACATTG
CAGCCAGAGA TAGCCGCGCG GTTTTATCAA CGCTTCAGTC AGTTTGCGTT GTTAGGCCCG
GTGCGGTCGT TCGCCCGGGT GGTGGGGCGC AACGGTATTC AGGAGGCGTT TCTGCGTGCG
GTTGCGGCGC TGGAGACGGC GGGGAGTTCG GCCGCGTTGC GCGAACACCG GGTGTTGGAG
GTGTTGTTGC TGCTGGCGGA ACAGGCTGGG GTGGTGCTGG CGCCGCCATC GGCCTTGAGC
TGGACGGAGA AGGTGCAACG GTTGGTGGCG CAACGCCCCC ATGCGGACTG GTCCGCCGCC
GGGGTGGCCG CTGCACTGGC CGTCAGCGTC AGTACGCTGA ACCGGCGACT GGCTCAGGAG
GGCGTTACCA TCGCCGCCTG TGTCCGGGAT ATTCGGCTGG ATGCGGCGCT GACGCTGTTG
CAATCGTCCG ATCGGCCGGT CGCCGTCATC GCGCAGGATG TCGGCTATGT GTCGCACAGT
AAGTTTACCG CTGCGTTCCG TCGTCGTTTC GGTGTGGTGC CTTCGGCGCT GCGTCCTTAA
|
|---|
| Protein sequence | MLNEYIIPLP AGAEPVPFYA PMSEAFSHQV VARRQYLLRT VVMRADLIGL VVSGNKQLVT
PEGGNVFVPG ELFVLPRGTQ WDVINDPAPQ GNYVARILTL QPEIAARFYQ RFSQFALLGP
VRSFARVVGR NGIQEAFLRA VAALETAGSS AALREHRVLE VLLLLAEQAG VVLAPPSALS
WTEKVQRLVA QRPHADWSAA GVAAALAVSV STLNRRLAQE GVTIAACVRD IRLDAALTLL
QSSDRPVAVI AQDVGYVSHS KFTAAFRRRF GVVPSALRP
|
|---|
| |