| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0972 |
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| Symbol | |
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| ID | 8088089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 1109638 |
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| End bp | 1110984 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644835045 |
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| Product | glycoside hydrolase family 28 |
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| Protein accession | YP_002986600 |
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| Protein GI | 242238419 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.367864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATTT CGCTTGATGA GGTCACTATC AATCGGGATG GTTCCGTGTT GGTCACGGCC
TTATTGCAAC GGATGATCGA CAAGATTCAC GATGCCGGCG GCGGTACGCT GATCGTCACG
CCGGGCATTT ATCGTACCGG TACGCTGGTA TTACCCTCCG ATTTTTGTCT GCAACTCGAT
GCCGGCGCGA CGCTGCTGGC CAGCGCTGAC TATGGCGATT ACGCAGCAGC GCAAACGCTG
ACCACGGCGG AGCTCTCGAA CAGCGCGTTG CTGTACGCCA GAGGGCAGCA AAATATTACC
CTGTGCGGCG CCGGGAAAAT CGACGGCAAC GCTGACGCCT TCTTTTCATC ACAGGCGGAT
GAACAAGGAT ACCGGCTGCC CCATAGCCAT CGCCCGCGCA TGGTGGTCTT TGAAGATTGC
CAGGCGATCA GGTTGCAGGA CATCACCCTT ACCCAATCGC CGATGTGGAC GGTACATCTG
GTGAGCTGTG CGCAGGTGTT TATCGCCAGA ATCTGCGTGG ATAACGATTT AACCATGGCG
AATACCGATG CGCTGGATAT CGACAGCTGC CAGCAGGTGC ACATCAGCGA TTGCCATTTC
AGCGCCGCAG ACGACGGTAT TTGCCTGAAG ACAACGCGCA AAACGCCGCA AATACAACGC
CCGCTCCGCA ATGTCACCGT GACGAACTGC ACGCTGCGCT CAAAAAGCTG CGCCATCAAA
ATCGGCACCG AAACCTTCGC CGATATTGAG AACGTGACGA TAAGCAATTG CTCGATATAC
GAATCAAACC GCGGCATCGG TATTATTTCC CGCGACGGCG GACGGTTCTC CCGGCTTATT
TTCAGCAATA TTACTTATTC ATGCGCGTAT GCCCATGCCT GCCATTGGGG AAAATCAGAT
CCGATATTTA TTTCCGTTCG ATTCCGTGAT CCGGAAATTC GGCCAGGTAA TATTTCCGAT
GTTGCATTCA ATAATATTGT CGGCGTAACG GAAGGCGCGA TTAATTTGCA TAGCGAGATT
CAGGGGGCGA TTGAAAATAT CGCATTCAAT GCCGTTTCTA TCCGCCAGTT GCCCTCAGAT
AATCACGCCC AGGGAGAATA CGATATCCGC CCGCCCTGCA ACCCGGAACG CCCGACCGGC
ATGGGGCTGG ACAACGCCTA CCGGGTGAAT CCGCAGACCG GCCGCGCATT CGGCGTGGAA
AAATACCCCG GCGGTTTACC GGCGATTTTC GCCAAAGGCG TCGCCTCATT ACATCTCAAC
GACATTCAGA TTATCCGCCC GGATCATTTA CCGCCCGGCT GGAACCCACA GGCTATTGTG
ATGGAGGACG CAATAACCGC ACCGTAA
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| Protein sequence | MRISLDEVTI NRDGSVLVTA LLQRMIDKIH DAGGGTLIVT PGIYRTGTLV LPSDFCLQLD
AGATLLASAD YGDYAAAQTL TTAELSNSAL LYARGQQNIT LCGAGKIDGN ADAFFSSQAD
EQGYRLPHSH RPRMVVFEDC QAIRLQDITL TQSPMWTVHL VSCAQVFIAR ICVDNDLTMA
NTDALDIDSC QQVHISDCHF SAADDGICLK TTRKTPQIQR PLRNVTVTNC TLRSKSCAIK
IGTETFADIE NVTISNCSIY ESNRGIGIIS RDGGRFSRLI FSNITYSCAY AHACHWGKSD
PIFISVRFRD PEIRPGNISD VAFNNIVGVT EGAINLHSEI QGAIENIAFN AVSIRQLPSD
NHAQGEYDIR PPCNPERPTG MGLDNAYRVN PQTGRAFGVE KYPGGLPAIF AKGVASLHLN
DIQIIRPDHL PPGWNPQAIV MEDAITAP
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