Gene Dd703_0733 details

Gene Information

• Locus tag: Dd703_0733
• ID: 8088006
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 832070
• End bp: 835357
• Gene Length: 3288 bp
• Protein Length: 1095 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644834805
• Product: CRISPR-associated helicase Cas3 family
• Protein accession: YP_002986366
• Protein GI: 242238185
• COG category: [R] General function prediction only
• COG ID: [COG1203] Predicted helicases
• TIGRFAM ID: [TIGR02562] CRISPR-associated helicase Cas3

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATTT TGCTGGTTTC CGAATGCAAC AAGCGGGCGC TGGTGGAAAC CCGTCGGGTA 
TTGGATCAGT TCGCTGAGCG TAAAGGCGAA CGCACCTGGC AGACCGCCAT CACCGAAGAA 
GGGCTGAAAA TGCTGCGCCA GTTGCTGCGG AAAACCGCGC GGCGCAACAC CGCCGTCGCC 
TGCCACTGGA TTCGCAGCGC CAATCACACC GAACTGCTGT GGATTGTCGG CAATCTGCGG 
CGTTTCAACC TGCAGGGCAG CGTACCGACC AACCGCACCG AGCGCGATAT TCTGCGCAGC 
AACGATGAAA ACCCGTGGCA TAGTGCCGAA GCCTTCAGTC TGCTGGCGGC GATTGCCGGG 
CTGTTTCACG ATATCGGCAA GGCCAATGCG CTGTTTCAGG CGGGGTTACA GGGTAATGGG 
CCGCGCAGCC AGCCTTATCG CCATGAGTGG GTATCACTGC GGCTGTTTCA GGCGTTTGTC 
GGCAAGCAGG ACGATACCGA CTGGCTGACA ACGCTGGCTG CCGTCGGCCC AGATGCCGAA 
GCGGCGCTGC TGGCGCGGTT GCAGCAGGAC GCGAAAATCC CCAAGCCGTC GCCGTTTAAC 
AGCTTGCCGC CATTGGCGCA GGTGGTGGGT TGGCTGATTG TGTCGCACCA CCGCTTGCCG 
CTGTTTCATA CCCCGACGGA CGGCGAATCG AGCGGTGCGC CGCAACTGGA ATTTATCGAC 
CATTGGCTCA ATGACCATCT ATCACCGCGC TGGAATGCCA TTAACCACCT GCGCCCGGAT 
ATCAGCACGC AAGAATGGCA ACAGGTGTGG CAATTCCCAC ACGGCACGCC GCTGCAAAGC 
CGTATTTGGT GCGAAAAGGC GCGCAAGTTC GCCACCCGTG CGCTGAAGTT ACCCTCGCTG 
ATGACCGTCG GTCAGTTGGA TCAGCGGCTG ACGGTGCATC TGGCACGGCT GGTGTTGATG 
CTGGCGGATC ACCACTATTC CTCTGCTGCC GCCACGACCG GCTGGCAGGA TCCCCGCTAT 
GGGGTATGGG CCAACACGGA CAGGAAGACC GGCAAGCTCA AGCAGCAACT GGACGAACAC 
TGCGTCGGCG TTGGGCAAAA CGCGCTGTTG CTGGGGCGCA GCTTACCGCA CCTGCGCGAC 
ACGCTGCCCG CCATCACCCG GCACAAAGGC TTTCGCCAGC GCAGTACCGA TGCGCGTTTT 
CGCTGGCAGG ATAAAGCGTT TGACAAGGTT TGCGCGATAC GTGAGCAGGC CGCCCGCCAC 
GGCTTCTTTG GCGTCAACAT GGCGTCCACC GGTCGCGGCA AAACACTGGC CAATGCCCGC 
ATCATGTACG CGCTGGCAGA CGAATCCACC GGGTGTCGCT TTTCGGTAGC GCTCGGCCTA 
CGCACCCTGA CATTGCAAAC CGGCGACGCG CTGCGCCAGC GCCTGACGCT GGATGAGGAC 
GATCTGGCGG TGTTGATAGG CTCCCAGGCA GTGCAGGAAC TGCATGAGCT GCGCCAGCAG 
GAAGCGGGGG CAGCGCGGAC TGGCAGTGAA TCCGCCGAGT CGCTGTTTAG CGAACATCAG 
TACGTCAGCT ACCAGGGCTC GCTGGATGAT GGTCGGCTGA AAACCTGGCT GGAAAAATCG 
CCGACGCTGC ATCAACTGCT GAGCGCGCCG GTGCTGGTGA CGACGATTGA TCATCTGATG 
CCCGCTACCG AAAGCCTGCG CGGCGGCCAC CAGATTGCGC CGATGCTACG GTTGCTGACC 
TCTGATCTGG TGTTGGATGA ACCGGACGAT TTCGGGCTGG AAGACCTGCC CGCGTTGTGT 
CGGCTGGTGA ATTGGGCGGG GATGCTTGGC TCACGGGTGC TGCTGTCATC CGCCACGCTG 
CCGCCCGCGC TGATTCGGGC ACTGTTCGAA GCCTACCTGA ATGGCCGTGC CGCCTGGCAG 
CAGGCGTATG GCGAACCGGG TACGCCGCTG ACTGTCTGCT GTGGCTGGTT TGATGAGTTC 
GACAGCCAGT GTCAGACCAT AGCCGATACC CTGGCTTTTG CCGACCAGCA TCAGGCGTTT 
GTCGCCGGGC GCATCAGTAA GCTGCAACAG CAGGAACAGC GGCTGCGCTG GGCAGAGATT 
GAACCGGTCG TCAGCACTGA GCGAGGGGCG AGTGCGGTGT GTCAGGCGGT GGCGCAAACC 
CTGCACCCAC GGCTGTTCGC GCTGCACCAG CAACACCACC AGACGCATTC GTCGGGGAAA 
ACCGTGTCGC TGGGGTTGAT TCGTATGGCC AACATCAACC CGCTGGTGGC GGTGGCGCGC 
GCACTGATGG CGATGCCCTC GCCGCCGGAC TGCTGCGTGC ATTACTGCGT CTATCACAGC 
CAGCACCCGC TGGCGATGCG TTCCCACATC GAAGCGCGGC TGGATGCGGC CCTGATGCGC 
AAACACCCGG AGGCACTGTG GCAGGTGGCG GAAATTCGTC ATGCCATCGA ACAGCAGCCG 
CAACAGCATC ATGTGTTTGT GGTGCTGGCC ACCTCGGTGG CGGAAGTGGG TCGCGATCAC 
GATTATGACT GGGCCATTGC CGAACCCAGT TCGATGCGTT CGCTGATCCA ACTGGCCGGG 
CGTATTCTGC GCCACCGCCA GCGTGACGAG TTTGTGCCGT CCTCGCCCAA TTTTTATTTG 
CTAAGCCATA ACGTGCGGGC GTTGAAAGGG GAGCTGCTAG CGTTTTGCCG CCCCGGTTTT 
GAAGCGAAAG ACGGCTTCAC CCTCGCCAGC CACGATCTGC GGGAGATCCT CAAACCGGAG 
GATTATCAGA GCATTAGTGC TGCGCCACGT ATTACCGAGC CAACGCCACC GATAGACCTC 
AAAAACCTGA CGCTGATAAG CCTTGAGCAC GCGGCATTAA AGCTGGTGTT GTTGGGGAGG 
AAAAAACCAA AACCCGCAGA TAAACCTGCG GCGGTGTGGT GGTGGCGCAA ACCGCTGCAC 
TGGAACGGCG AACTGCAACG GCACACGATG TTTCGCCGGT CAGAGCCACA GCTGCGCTAC 
AGCCTGTGGC TGGAAGAGGA AGACGGCGAA CCAGGCTTTA TGGTGCAAGA CGATGGGCCG 
AGCGGCTGGA AAAAAATCGA TGTGATTCGC CCGGTACAAC AAGCCATGGC CGATGGCGTC 
AGCCAGTGGG TAGCGATGGA TTACACCGCG CTTTACCTGC AACTGGCCGA GGAGAAACAG 
CGGGAACTGG CGTGGATCAG CGCCCGCTTC GGTGAAATCA GCCTGAGAAA ACAAGATAAC 
TCATGGTGCT GGCACCCGCT GTTAGGGGTA TTTGGAGAAA AATCATGA 

 

Protein sequence

MNILLVSECN KRALVETRRV LDQFAERKGE RTWQTAITEE GLKMLRQLLR KTARRNTAVA 
CHWIRSANHT ELLWIVGNLR RFNLQGSVPT NRTERDILRS NDENPWHSAE AFSLLAAIAG 
LFHDIGKANA LFQAGLQGNG PRSQPYRHEW VSLRLFQAFV GKQDDTDWLT TLAAVGPDAE 
AALLARLQQD AKIPKPSPFN SLPPLAQVVG WLIVSHHRLP LFHTPTDGES SGAPQLEFID 
HWLNDHLSPR WNAINHLRPD ISTQEWQQVW QFPHGTPLQS RIWCEKARKF ATRALKLPSL 
MTVGQLDQRL TVHLARLVLM LADHHYSSAA ATTGWQDPRY GVWANTDRKT GKLKQQLDEH 
CVGVGQNALL LGRSLPHLRD TLPAITRHKG FRQRSTDARF RWQDKAFDKV CAIREQAARH 
GFFGVNMAST GRGKTLANAR IMYALADEST GCRFSVALGL RTLTLQTGDA LRQRLTLDED 
DLAVLIGSQA VQELHELRQQ EAGAARTGSE SAESLFSEHQ YVSYQGSLDD GRLKTWLEKS 
PTLHQLLSAP VLVTTIDHLM PATESLRGGH QIAPMLRLLT SDLVLDEPDD FGLEDLPALC 
RLVNWAGMLG SRVLLSSATL PPALIRALFE AYLNGRAAWQ QAYGEPGTPL TVCCGWFDEF 
DSQCQTIADT LAFADQHQAF VAGRISKLQQ QEQRLRWAEI EPVVSTERGA SAVCQAVAQT 
LHPRLFALHQ QHHQTHSSGK TVSLGLIRMA NINPLVAVAR ALMAMPSPPD CCVHYCVYHS 
QHPLAMRSHI EARLDAALMR KHPEALWQVA EIRHAIEQQP QQHHVFVVLA TSVAEVGRDH 
DYDWAIAEPS SMRSLIQLAG RILRHRQRDE FVPSSPNFYL LSHNVRALKG ELLAFCRPGF 
EAKDGFTLAS HDLREILKPE DYQSISAAPR ITEPTPPIDL KNLTLISLEH AALKLVLLGR 
KKPKPADKPA AVWWWRKPLH WNGELQRHTM FRRSEPQLRY SLWLEEEDGE PGFMVQDDGP 
SGWKKIDVIR PVQQAMADGV SQWVAMDYTA LYLQLAEEKQ RELAWISARF GEISLRKQDN 
SWCWHPLLGV FGEKS