Gene Dd703_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0488 
Symbol 
ID8088812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp542800 
End bp543822 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content65% 
IMG OID644834558 
Productsuccinylglutamate desuccinylase 
Protein accessionYP_002986121 
Protein GI242237940 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2988] Succinylglutamate desuccinylase 
TIGRFAM ID[TIGR03242] succinylglutamate desuccinylase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATT TTCTGGCTCA GACCCTACGG GGTGAAATGT CGACGCCGTC CTGCGGCGAG 
CAAGGTGGTT TGCGCTGGCG CTGGTTGGGG GAAGGGGGGC TGGAACTGAC GCCGACGGCG
GGGTATCAGC GTGCGGTGGC GCTGTCGGCC GGGATCCACG GCAATGAAAC CGCGCCGATC
GAACTGCTCG ACCGGCTGGC GGGCGATCTG TTGACCGGCC GGCTTCCCTT GACGGTACGG
CTGCTGCTGG TATTGGGTAA TCCGGCGGCG ATCCGCGCGG GAAAACGCTA CTTGCACAGC
GACATCAACC GGATGTTCGG CGGGCGCCAC AGCCGTTTCC CGCTCAGCGG CGAGACAGTG
CGCGCCCACT GGCTGGAACA GGCGCTGACG GCGTTTTTTG CTGCGGATGT GCTGACCGGC
GGCGTCGAGC GTTATCACTA CGATCTGCAC ACGGCGATTC GTGATTCGCT GTTGCCGCGC
TTCGGGCTGC TGCCGTTCCA GGAACGTCCT TATAATCTGC TGCTGTTGGA AAGCCTGACG
GCGGCGGAGC TGGATGCGCT GGTGGTACAC CGCGAGCCGG GCGGCACCTT CAGCCATTTC
AGCAGCGAGC AACTCATGGC GGCCAGCTGC ACGCTGGAGT TGGGCAAAGC GCGCCCGTTG
GGGGAGAACG ACCTCAGTCA GTTCGATGCG ATCGACCAGG CGCTACGGGC GTTGGTGAGC
GGTACGTCGA TGCCGGTACG CCGGGTGGCG CCGATGCGGT TATTCAGCGT GGTGCGTTCG
CTGATGAAAC GCAGCGAGGC GTTTCAATTG CATGTCGCCG GTGATGCGCC GAATTTCACG
CCGTTTGCAC GCGGCACGTT GCTGTGCGAG CAACCGGGGG AAGCGTACCG GGTCGCCCAT
GAGCGGGAGT GGATATTGTT TCCCAACCCG TCGGTGGCGC AAGGGCTGCG TGCCGGCATG
GTGCTGACGG AGATAGCGCC GGGCGAGTTG GCGGGGGGCG TGTTGTCGCA ACCGGCGGAC
TGA
 
Protein sequence
MNDFLAQTLR GEMSTPSCGE QGGLRWRWLG EGGLELTPTA GYQRAVALSA GIHGNETAPI 
ELLDRLAGDL LTGRLPLTVR LLLVLGNPAA IRAGKRYLHS DINRMFGGRH SRFPLSGETV
RAHWLEQALT AFFAADVLTG GVERYHYDLH TAIRDSLLPR FGLLPFQERP YNLLLLESLT
AAELDALVVH REPGGTFSHF SSEQLMAASC TLELGKARPL GENDLSQFDA IDQALRALVS
GTSMPVRRVA PMRLFSVVRS LMKRSEAFQL HVAGDAPNFT PFARGTLLCE QPGEAYRVAH
EREWILFPNP SVAQGLRAGM VLTEIAPGEL AGGVLSQPAD