Gene Dd703_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0334 
Symbol 
ID8088569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp384886 
End bp385446 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content54% 
IMG OID644834400 
ProductFimbrial assembly family protein 
Protein accessionYP_002985971 
Protein GI242237790 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATGA CCAATCTTCT CCCCTGGCGT CAGTCGCGGC GGCAATATCG TATGCGCCGG 
CTCGTGTGCG CACTGGTCAT ACAGTTTGCG GCGACATCGA TCGTGTTATT CGCCATGCGG
TTGCAGTTTC GCCAGCAGCA ACATGTATTG CGGCAACTGA TCGTGCAGAT CTCGGATGGA
CAACGACAGT ATGCCGGGCT GTCCCTTCAG GCCGCTGATC TTCGTCGGCA AGTGCTCGCC
CAGCAGGCTT TGTTGGATCA AAAACGTCAG AATCAGCAGC GGAACCAGCG TTATCTTACG
TTGCTGGAAC AGCTTCCCCG CGTTATCCCC GATGTCATTT GGTTGACATC GGTCAGTGAC
AGCAATGCGG CGATACGATT ATCCGGAGTG AGTAATCACT ATTCTTCTGT GGTCGAATTT
TCGAAAAGAC TTGCCGGATT ACCCGTATTT ACAGTGGCTG AGTTGCAGGA GGCACAACGA
GACCACAGCG ATGCATCCAG GCTGCAATTC TCGTTGCGCC TTTACTGGAA ACCTGTAACC
GATGCGGAGA GACAGCCATG A
 
Protein sequence
MPMTNLLPWR QSRRQYRMRR LVCALVIQFA ATSIVLFAMR LQFRQQQHVL RQLIVQISDG 
QRQYAGLSLQ AADLRRQVLA QQALLDQKRQ NQQRNQRYLT LLEQLPRVIP DVIWLTSVSD
SNAAIRLSGV SNHYSSVVEF SKRLAGLPVF TVAELQEAQR DHSDASRLQF SLRLYWKPVT
DAERQP