Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0334 |
Symbol | |
ID | 8088569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 384886 |
End bp | 385446 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644834400 |
Product | Fimbrial assembly family protein |
Protein accession | YP_002985971 |
Protein GI | 242237790 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3166] Tfp pilus assembly protein PilN |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGATGA CCAATCTTCT CCCCTGGCGT CAGTCGCGGC GGCAATATCG TATGCGCCGG CTCGTGTGCG CACTGGTCAT ACAGTTTGCG GCGACATCGA TCGTGTTATT CGCCATGCGG TTGCAGTTTC GCCAGCAGCA ACATGTATTG CGGCAACTGA TCGTGCAGAT CTCGGATGGA CAACGACAGT ATGCCGGGCT GTCCCTTCAG GCCGCTGATC TTCGTCGGCA AGTGCTCGCC CAGCAGGCTT TGTTGGATCA AAAACGTCAG AATCAGCAGC GGAACCAGCG TTATCTTACG TTGCTGGAAC AGCTTCCCCG CGTTATCCCC GATGTCATTT GGTTGACATC GGTCAGTGAC AGCAATGCGG CGATACGATT ATCCGGAGTG AGTAATCACT ATTCTTCTGT GGTCGAATTT TCGAAAAGAC TTGCCGGATT ACCCGTATTT ACAGTGGCTG AGTTGCAGGA GGCACAACGA GACCACAGCG ATGCATCCAG GCTGCAATTC TCGTTGCGCC TTTACTGGAA ACCTGTAACC GATGCGGAGA GACAGCCATG A
|
Protein sequence | MPMTNLLPWR QSRRQYRMRR LVCALVIQFA ATSIVLFAMR LQFRQQQHVL RQLIVQISDG QRQYAGLSLQ AADLRRQVLA QQALLDQKRQ NQQRNQRYLT LLEQLPRVIP DVIWLTSVSD SNAAIRLSGV SNHYSSVVEF SKRLAGLPVF TVAELQEAQR DHSDASRLQF SLRLYWKPVT DAERQP
|
| |