| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0260 |
|---|
| Symbol | |
|---|
| ID | 8088495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 294505 |
|---|
| End bp | 295674 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644834328 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_002985899 |
|---|
| Protein GI | 242237718 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGACT CCATCAACAC CATCGCAACA ACCCTGAGCG ACGACCTGAT TAACGCCGCC
CACTTTATCC ACGCCAACCC GGAACTGGGG CTGGAAGAGA CGAAAGCGCA GGCCACGCTG
GTCGAGCTGC TGCGCAAATA CGGGTTTTCC GTCACCACCG GGCTCGCCGG CATGGACACC
TCGTTCGTGG CGGAATTCAG CACCGGCGCC GGCCCGACCA TCGCCTATCT GTCCGAATAT
GACGCGCTGC CGGGTATCGG CCACGCCTGC GGCCACAACA TCATCGGTAC CGCCGGCGTC
GGCGCGGGCC TCATCACCAA ACAGATCATG GAACAGCGCA ATCTGTCCGG CACGGTGAAA
GTCTACGGCA CGCCCGCCGA GGAGATAGGC ATCGGCAAAA TCCGCATGAT CGACGCCGGC
CTGTTCGCCG GGGTGGACGC CGCCATGCTG ATGCACCCGT CCGATACCGC CATGGCCGAC
GACATCTCCT TTGCCAACTA CACCTTCGAA TATCACTTCA CCGGCAGCCC GGCGCACGCC
GCCGCCTACC CGTGGGAAGG CCGCAACGCC CTGTCCGGGG TGATTGAAAT GTTCAATGCG
GTCAACGCCC TGCGCCTGCA TGTGCGCGAT TTCTGCCGAA TCAACGGCAT CATCACCGAA
GGCGGCGTGG CCTCCAACAT CATCCCGGCC AGCGCCAAAG CGCTGTTCAA CCTGCGGGCG
CTGGACGGCG AAACCCTGAA AACGGTGATC GAAAAAGTGC ACAACTGCGC CAAAGGCGCG
GCGCTGGCGA CGGATACCGA GGTCGCCATC ACCCAGATCG GTCTCGGCAC CAAAGAAATC
CGTAACAACA AACGCATCGT GTCGCTGGTC GCCAGCCACT TCGACGCTTT CGGCGTACCA
CACATTCCGC GTGATCTGAC GCAAGGCATC GGCTCCACCG ATATGGCCAA CGTCACCCAC
GAAATACCGG CGGTGCAGTC CTACATCGGC ATCGGTAAAG AAGCGGGCGC GACCCACACG
CTGTCGTTCG CCAAGGCGGC CGGTTCGGCA ACCGGCGACC GCGCAGTGAT CGACGCCGCC
AAAGTGATGG CCGCCAGCGG ACTGCAAATG ATGACCGACC CTGCGCTGTT GGCCGACGTC
AAAGCCGAAT TCGATCAACG GCGGAAATAA
|
|---|
| Protein sequence | MIDSINTIAT TLSDDLINAA HFIHANPELG LEETKAQATL VELLRKYGFS VTTGLAGMDT
SFVAEFSTGA GPTIAYLSEY DALPGIGHAC GHNIIGTAGV GAGLITKQIM EQRNLSGTVK
VYGTPAEEIG IGKIRMIDAG LFAGVDAAML MHPSDTAMAD DISFANYTFE YHFTGSPAHA
AAYPWEGRNA LSGVIEMFNA VNALRLHVRD FCRINGIITE GGVASNIIPA SAKALFNLRA
LDGETLKTVI EKVHNCAKGA ALATDTEVAI TQIGLGTKEI RNNKRIVSLV ASHFDAFGVP
HIPRDLTQGI GSTDMANVTH EIPAVQSYIG IGKEAGATHT LSFAKAAGSA TGDRAVIDAA
KVMAASGLQM MTDPALLADV KAEFDQRRK
|
|---|
| |