Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_7111 |
Symbol | |
ID | 8022478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | + |
Start bp | 522323 |
End bp | 524113 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644833948 |
Product | ABC transporter related |
Protein accession | YP_002985082 |
Protein GI | 241666998 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.483113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.228237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCGCA AGAAGCTCGA TTTCCGCGCC GATGCCTATC GCCATGTGCT CGGCTTTGTT TTCCATCATT GGCGCCATCG GCCTGTACTG GTGGGCATTA TTGTCGTGCT GGTCATTGCC AGCACCCTGG CCGAAGTCAT GGTGCCGGTG TTTTCCGGCC AGATCGTCGA TGCCATCGCC GGCGGCAATG CGGCTGAGCG GGCACTGCGC GCCTTCGTCG TTGTCGTGGC GCTTGGCCTG ACCAGCGTGA CACTGCGCTG GTTCATCTTC AATGGCATCA TCCGGCTGAC GCTGCGCACC ATGGCGGATG TGACGAATAA CGGTTTCCAC AAGGTGCAGC GGTTTTCGAC CGACTGGCAC GCCAACAGCT TTGCCGGTTC GACAGTGCGC AAGATCACCC GCGGCATGTG GGCACTCGAC CAGCTCAACG ACCTGCTGCT GGTCGCACTG CTGCCCTCCA TCGTCATGCT GGTTGGCGCC AGTATCGTGC TCGGCAGCTA CTGGCCGATC ATGGGCCTGA TCGTGGCTGC GGGCTCGCTG ATCTATATCG GCGTGACCGT GGCGCTTTCC ATGGGCTTCG TGTCGCCGGC GGCGCGGCTT GCCAATGCCT GGGACACCAA GCTTGGCGGC GCGCTGGCGG ATGCGATCAG CTGCAATTCG GTGGTCAAGG CCTTCGGCGC CGAGACCCGC GAAGAGGCAC GCCTGCGCCA GGTGATGGCC AGATGGGACA GCCGGACGCG TCGGACATGG AAGCGCGGCA CGCTGAGCGG CACGATCCAG GGCTTCCTGA TGGTTGCGAT GCAGGCAGGT ATTCTGGGAA CGGGCCTGGT CATGTGGCGG CAGGGGCTGG CGACGCCTGG CGACATCACC TTCGTGCTGG CGATGTTCTT CGTTCTGCAG GGCTATCTGC GCAATGTCGG CCAGGACATC CGCAATCTGC AGCGTGCCGT CAACGACATG GAAGAACTGG TGCTGCTCGA CAAGATGCCG CTCGGCATCG AGGACAAGCC CAACGCCACG CCGATCAGGA TTGGCGAGGG CGAGATCGTC TTCGATCGCA TCACCTTCCA GTATGGCGCC CATCCCACGC CGCTTTATGA CGACTTTTCG GTCACCATCA AGCCGGGTGA GCGCGTCGGC CTGGTGGGAC ATTCGGGTTC CGGCAAGACG ACCTTCGTCA AGCTCATCCA GCGCCTCTAT GACGTCAACT CGGGCCAAAT CCGCATCGAC GGACAGGATA TCGCAGCGGT CAGGCAATCA AGCCTGCGCG GCCAGATCGC GATCGTGCAG CAGGAGCCCA TCCTGTTTCA CCGTACGCTG GCGGAAAACA TCGCCTATTC CAGGCCGAAC GCCTCGCGGC GCGAGATCGA ACAGGCGGCG AAACAGGCGA GCGCCCACGA CTTCATCATG GACCTTCCCA AGGGCTATGA GACGATGGTG GGCGAACGCG GCGTCAAGCT GTCGGGCGGC GAGCGGCAGC GTGTCGCCAT TGCCCGTGCC TTCCTGGCCG ATGCACCGGT GCTGATCCTG GACGAGGCGA CATCTAGCCT CGACAGCGAA AGCGAAGTGC AGATCCAGCA GGCCATGGAA CGCCTGATGA ACGGCCGCAC GACGCTGGTG ATCGCCCATC GGCTGTCCAC GGTGCGGGCG CTCGACCGGC TGCTGGTCTT CGACAAGGGA AAGATTGTCG AGGAAGGCGA CCACCAGGCG CTGATCAGGC TCAATAACGG TATCTATCGC CGGCTGTTCG AGCGCCAGGC GCTGGAACTG ACCAAGGGTC TGGTGGCGTG A
|
Protein sequence | MTRKKLDFRA DAYRHVLGFV FHHWRHRPVL VGIIVVLVIA STLAEVMVPV FSGQIVDAIA GGNAAERALR AFVVVVALGL TSVTLRWFIF NGIIRLTLRT MADVTNNGFH KVQRFSTDWH ANSFAGSTVR KITRGMWALD QLNDLLLVAL LPSIVMLVGA SIVLGSYWPI MGLIVAAGSL IYIGVTVALS MGFVSPAARL ANAWDTKLGG ALADAISCNS VVKAFGAETR EEARLRQVMA RWDSRTRRTW KRGTLSGTIQ GFLMVAMQAG ILGTGLVMWR QGLATPGDIT FVLAMFFVLQ GYLRNVGQDI RNLQRAVNDM EELVLLDKMP LGIEDKPNAT PIRIGEGEIV FDRITFQYGA HPTPLYDDFS VTIKPGERVG LVGHSGSGKT TFVKLIQRLY DVNSGQIRID GQDIAAVRQS SLRGQIAIVQ QEPILFHRTL AENIAYSRPN ASRREIEQAA KQASAHDFIM DLPKGYETMV GERGVKLSGG ERQRVAIARA FLADAPVLIL DEATSSLDSE SEVQIQQAME RLMNGRTTLV IAHRLSTVRA LDRLLVFDKG KIVEEGDHQA LIRLNNGIYR RLFERQALEL TKGLVA
|
| |