| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6810 |
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| Symbol | |
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| ID | 8022740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012858 |
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| Strand | - |
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| Start bp | 253207 |
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| End bp | 256503 |
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| Gene Length | 3297 bp |
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| Protein Length | 1098 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644833676 |
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| Product | Ti-type conjugative transfer relaxase TraA |
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| Protein accession | YP_002984810 |
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| Protein GI | 241666726 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCT ATCATCTCAG CATGAAGCCG ATCGCCCGCA GCGCTGGCCG CAGCGCCGTG
GCGTCCGCCG CCTATCGTGC GGCCGAGCGG CTGACGAACG AGCGTGATGG GCTAACCCAT
GATTTTAGCA ACAGGACAGG TGTCGAGCAT GCCGAGATCG TCTTGCCGGT TCGCTCTTCT
GCCTATTGGG CGATGAAGCG ATCGGCCTTG TGGAATGCCG CCGAGCGTGC CGAGAAGCGA
AGTGACGCCC GGATTGCCCG GGAATTCGAA ATCGCCCTGC CACACGAATT GAGTTCCGAT
CAACGCCTGG TGCTGACGCG GGCCTTTGCC GAAGATCTCG CCAATCGTTA TGGCGCTGCT
GTCGACTTTG CGATCCATCG GCCAGGTGAG GGAAGCGATA TCCGCAACAG CCATGCGCAT
CTGATGATGA CGACGCGTGA GGTGAGGGAA ACCGGTCTTG GCGACAAGAC GCTGCTCGAG
CGGGAAAACA GATGGCTTCT CGCCAATCAC CTGCCGCCAT CGCAGCTGCA GCTGAAGGAT
CTCAGACAGG CGTGGGAGCA TCTTGCCAAC ACGCACCTTG AGAGAGCCGG CCTCGATATC
CGTATCGATC ATCGTTCGCA TCTGGAAGCC GGGATCACGA TCGAGCCGAG CGAACATGTC
GGTGTGCATG CGACTGAGAT CAATCGCCAG GGTGGGGCAG TCTCGCGCGT CCGCATCTCA
CCGCAATCGG CCGATCGCAA TGCCGAGATC ATTCGCCGGC GGCCCGAAGA GATATTGAAG
CTCATCACCA ACGAGAAAAG CGTCTTCAAC CGTTATGATA TCGCCAGGGC TTTGCATCGC
ACCATCAACG ACGATGCGCA GACCTTCCAG AATGCTTTTG CATCGGTCAT GGCGTCGAAG
GCGCTTGTCG AACTCAGACC CGACAGTTCA AGCCTTCGCG GCCGTGACGG AGAGGCACGC
TATTCGACGG TCGAGATGGT GGCGATCGAG GGTGCGATGG CAACAGCCAC TGTTGCGATG
AAGACGCGCC AAAACCACGG TGTCTTCAAG CGCAATGTCG ATGCGGCCAT CGCCGATCAG
GACAGATCGA TCCAGGCGGG AAATCCTTCA CCGGGGCAGG GGCTGTCGGC TGAACAGCGC
CAGGCGATCG AGCATGTCAC GGGTCCCGGT CAGATCGCCG TGGTGATCGG TTTTGCCGGT
GCCGGCAAGA GCACGATGCT GGCAGCTGCC CGCCAGGCCT GGGAAGCGCA GGGTTATCGC
GTTCATGGCG CGGCTCTGGC CGGCAAGGCC GCGGAAGGCC TGGAGCAATC GTCCGGCATA
TCGAGCCGCA CCTTGGCATC GTGGGAATAC AGCTGGCAGG CCGATCGCGG TCGGCTGAAT
GCTCGTGACG TCTTCGTCAT CGACGAGGGC GGCATGGTCG GAAGTCGTCA GATCGCCCGC
TTCGTCGACG AGGTCAGACG GGCCGGCGCC AAGCTCGTCC TGGTCGGTGA CCATGAACAG
CTTCAGGCGA TCGGAGCGGG CGCGCCGTTT CGGGCGATTG CCGAAGCCGT CGGTCACGCG
CAACTGTCGG AAGTGCGCCG GCAAAGAACC GATTGGCAAA AGCAGGCCTC GATCGACTTC
GCCTCGCATC GGACTGCCGA CGGGCTTGCT GCCTACCAAG CACATGGCAA CATCCAGCTG
AAAGCAAACC GCGACGACGT GCTGAAGGCG ATCATTGCCG ATTACGTCGC TGACCGATCG
GCCAATCCCA ACGACACGCG CATTGCGATG GCCCATCGAC GCGACGACGT CCGTGCCATC
AATGCCGGCA TTCGCTCTCG GTTGCAGGAG CGCGGTGAGC TCTCAAGAAG CACCGGCACC
TCGGATGATC GTGGTGAGGA ACTCACCTAC CAGACCAGCA ATGGGAAGCG ATCTTTTGCG
CGCGGCGACC GCATCGTCTT CCTGGAGAAC GATCGTGATC TCGGCGTCAA GAATGGCATG
TTGGGCGAGG TGATCGCCGT CCAACCGGAC GCAATACAGG TTCGGCTTGA CGGCAAGGCG
CAGACGCAAG ATGGGCAACG TCAGGTGATC ATTCCGGTGA ACAGTTACCA GGCCTTTGAT
CACGGCTACG CCACGACGAT CCACAAGACG CAAGGGGCTA CCGTCGACCG GAGTTTTGTT
CTGGCGTCGA CGACGATGGA CCGGCATCTG ACCTACGTGG CGATGACCCG TCATCGCGAA
GGGGTGCAGC TCTATGCCGG GCTGGATGCG TTCAAGACGC TGCGCTCCCT GACGGAGACG
CTGAGCCGGT CAGGCGTGAA GGAGACGACG CTCGACTATA CCCATGACTT TGCCAATCGG
CGCGGCATGG AGGATCGCCG GGGGCAGGGC GAAGGTGAGG TCGCACCTGC GGTAATCACC
AAGGAGGCGG AGCGCATCGC GGACACGGCG GTTCCCAAGC CAACGCAGGA ACCGCGGCCG
CCGACACCGC TCGCAGCCCG CAGCATCGCC GATGGCGGCT CTTCGCACCA GGATCCCAAT
GTCGATGAAC GTCGCGATGA ACGTCGCGTG CTCATTGCGG CCGTGAAGAC CTATGCGATG
AGCGTCGAAG CGGTTGGACA ATCAAAGGCG ATGCCGGCAT TCGAACGAGA TTGGGAGGCG
GCAAAGCAGC TTGCGCCGCA GGTGTTCAAG GACGCGCGAG CGGCCATGGA CGTGTTGCGC
GGTCGCATCC TCGATGAAAA CGCCGATCCG GTCGCGCTCG CAAACCAACT CAGCACTTCG
CCCGAGACGA TCGGCGCGCT CGCCGGCAAG ACCGGCCTGT TCGGAGACAA CGCTGAACGC
AAACACGCGC TTTCCCGGAT CGATGCGCTG GCTTCGCATG TTCGCCAATC CGCCAACACC
TGGCAGCGTC GCCTCGCGGC TGAATGCGGC TCGGAGCGCT GGAAACGAGA AAAGCAGGAC
GCGGTCGAGG TTCTGGGGCC GAGCCGCCGG AGTGAGGCGC TGCTGCGCCA GCTCGACGAT
CTCCCCTATA GCGACAAGGC CAAGTTCGTC GAACGACTGG CGGCGACACC GGAGGGCCGT
CAGGCGCTTG CCGAGGCAAA GGACATCGCT ACTGCGATCG AAACGCGCTT CGGTCGCGCC
GATCCCTCAG ATCGCGCGGA TCAGCTGAAG CGCGCCGGGC CTGATCAGGC TGGGGACATC
GAGCGTATCC GCGAGGTTGC TCGCCTTGCC GATCGTAGTC ATCGCGCGGA GCTCACCCGG
CAGATGGAGT TGAAGCGGTC GCTGAAGCGG GGCAAGTCCT TGGGCCTTGG GATGTAG
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| Protein sequence | MAIYHLSMKP IARSAGRSAV ASAAYRAAER LTNERDGLTH DFSNRTGVEH AEIVLPVRSS
AYWAMKRSAL WNAAERAEKR SDARIAREFE IALPHELSSD QRLVLTRAFA EDLANRYGAA
VDFAIHRPGE GSDIRNSHAH LMMTTREVRE TGLGDKTLLE RENRWLLANH LPPSQLQLKD
LRQAWEHLAN THLERAGLDI RIDHRSHLEA GITIEPSEHV GVHATEINRQ GGAVSRVRIS
PQSADRNAEI IRRRPEEILK LITNEKSVFN RYDIARALHR TINDDAQTFQ NAFASVMASK
ALVELRPDSS SLRGRDGEAR YSTVEMVAIE GAMATATVAM KTRQNHGVFK RNVDAAIADQ
DRSIQAGNPS PGQGLSAEQR QAIEHVTGPG QIAVVIGFAG AGKSTMLAAA RQAWEAQGYR
VHGAALAGKA AEGLEQSSGI SSRTLASWEY SWQADRGRLN ARDVFVIDEG GMVGSRQIAR
FVDEVRRAGA KLVLVGDHEQ LQAIGAGAPF RAIAEAVGHA QLSEVRRQRT DWQKQASIDF
ASHRTADGLA AYQAHGNIQL KANRDDVLKA IIADYVADRS ANPNDTRIAM AHRRDDVRAI
NAGIRSRLQE RGELSRSTGT SDDRGEELTY QTSNGKRSFA RGDRIVFLEN DRDLGVKNGM
LGEVIAVQPD AIQVRLDGKA QTQDGQRQVI IPVNSYQAFD HGYATTIHKT QGATVDRSFV
LASTTMDRHL TYVAMTRHRE GVQLYAGLDA FKTLRSLTET LSRSGVKETT LDYTHDFANR
RGMEDRRGQG EGEVAPAVIT KEAERIADTA VPKPTQEPRP PTPLAARSIA DGGSSHQDPN
VDERRDERRV LIAAVKTYAM SVEAVGQSKA MPAFERDWEA AKQLAPQVFK DARAAMDVLR
GRILDENADP VALANQLSTS PETIGALAGK TGLFGDNAER KHALSRIDAL ASHVRQSANT
WQRRLAAECG SERWKREKQD AVEVLGPSRR SEALLRQLDD LPYSDKAKFV ERLAATPEGR
QALAEAKDIA TAIETRFGRA DPSDRADQLK RAGPDQAGDI ERIREVARLA DRSHRAELTR
QMELKRSLKR GKSLGLGM
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