Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6648 |
Symbol | |
ID | 8022558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | + |
Start bp | 79259 |
End bp | 80407 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644833515 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002984649 |
Protein GI | 241666565 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0122953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATGA AAACCATAAT CCTGACGCTG GCATCTGCGG CATTCGCCAC CGCAGCTTTC GCCGAGGACC CGATCAAGAT CGGCGTGCCG GTCGGGCTGT CTGGCGCAAA CAGCGTGGTC GCGCCATCCG TCGTCCAAGC TGCGGAGCTT GCCGTCGAAG AGATCAATGC CAAAGGCGGC GTGCTCGGGC GGCCATTGGA GCTTGAGATC GCCGACGACG CATCAGGGGC GGCCGGCGCG CAAAAGGCCT TCGATTCCCT GGTTTTCCAA AAGGAGGTGA ACGTGATCAT CTCTATGGAG ACGAGTGCTG CGCGCAATGC CGGACTGCCG ATTATTTCCA AGGGTGACGT GCCATACATC TACACGTCGT TCTACGAAGG CAAATCCTGC AACGCCAATC TTTTCGTCGA TGCCTGGGTT CCAGAACAGC AGGTGCCGCC TGTCGTTGAC AATTTCATCA GCAAACAGGG CGCAAAGAAA TTCTTCCTGA TCGGTTCGGA TTATGCCTTC GGACGCGGCA TGCTGACCTT CGCCAAGGGC TATATCGAAA AAGCCGGGGC TCAGGTCGTC GGCGAGGAAT ATCTGCCGAT GGACGGCAGC GACTGGACGG CCATCATCTC CAAGGTCCGC TCCTCGGGCG CCGACGCCAT CATCACCTCG ACAGCCGGCG GCGCACCGAA CGTGACCTTG ACCAAGCAGT TGCGCTCGTC TGGCGTCACC CTGCCTTACG GCAATCTCGC CGTTGACGAA GGCACCGCCA AGAGCATGGG CGCGGATGCC AAGGACATCT TCCTCTCGGC ATCCTACGTC ACCGGCATCG ATAGCCCGGA AAACAAGGCT TTTCTCTCGG CCATGGATAA GAAGTTCGGC AAGGAACTGC GCACGCCGAA CGATCTTTCC GTGCCACAAT ATGAAGCGAT CTACCTTTAC AAGGCAGCCG TCGAAAAGGC CGGCAGCACG GATACGGCGG ACGTGCTCAA AGCCCTCCCG GACGCATCCT TCACCGGTCC GCGCGGCAAG ATCTCCATGA ACAAACAGCA CCACGCGCCG CTGACGATGT ATCTTGGCCA GGTAAAGGAC GATGGCAGCG TTGCAGTCGT CGATAGCTTC AAGGACGTCG ATCCCGGCGA TCAGTGCCCG AATCTCTGA
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Protein sequence | MQMKTIILTL ASAAFATAAF AEDPIKIGVP VGLSGANSVV APSVVQAAEL AVEEINAKGG VLGRPLELEI ADDASGAAGA QKAFDSLVFQ KEVNVIISME TSAARNAGLP IISKGDVPYI YTSFYEGKSC NANLFVDAWV PEQQVPPVVD NFISKQGAKK FFLIGSDYAF GRGMLTFAKG YIEKAGAQVV GEEYLPMDGS DWTAIISKVR SSGADAIITS TAGGAPNVTL TKQLRSSGVT LPYGNLAVDE GTAKSMGADA KDIFLSASYV TGIDSPENKA FLSAMDKKFG KELRTPNDLS VPQYEAIYLY KAAVEKAGST DTADVLKALP DASFTGPRGK ISMNKQHHAP LTMYLGQVKD DGSVAVVDSF KDVDPGDQCP NL
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