Gene Rpic12D_4551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4551 
Symbol 
ID8022239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1189820 
End bp1190284 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content64% 
IMG OID644833324 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_002984464 
Protein GI241666105 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.610614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0178706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTTC AGGACGTTTA TTCACCCAAT GCAGTCCATA TCCCGCTCTC CTGCACGCTT 
CAGGAGGCGG CACAGCAGAT GCGTCAGAGA CATGTCGGTG CGCTGGTCGT GACGGAGAAC
ACCCCGTCTG GCCCCCGCGC AATTGGCGTC GTCACGGATC GCGACATGGT GCTCGATGCG
GTCGCGGTTG GCGTTAGCCC CTCACAGACC TGTGTGGCCG ATGTGATGAG CCGAGGCATC
CTCAACGTAC CGCTCGACGC AAGCCTGAGC GATGCGTTGC AGGAAATGCT TTCGTCCGGC
GTGCGACGTG TTGGCGTGAC GTCCGACGGC GCGCTCGTTG GGGTGCTGTC CCTGGACGAC
GTGCTCGGCG CCATGGCCAC CGAGCTGGGG CTGATCGCCC GCCTTGTCCA TAACGAGCGC
GAACGCGAGA CGACCGGTAG CGTCCAGCCG CCGCTGAGCG TGTAA
 
Protein sequence
MRVQDVYSPN AVHIPLSCTL QEAAQQMRQR HVGALVVTEN TPSGPRAIGV VTDRDMVLDA 
VAVGVSPSQT CVADVMSRGI LNVPLDASLS DALQEMLSSG VRRVGVTSDG ALVGVLSLDD
VLGAMATELG LIARLVHNER ERETTGSVQP PLSV