| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4508 |
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| Symbol | |
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| ID | 8022196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1145766 |
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| End bp | 1146851 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644833282 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002984422 |
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| Protein GI | 241666063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.50904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.396278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCA AACGAATCGT CGCGGCCAGT GCGTGTATTG CGCTGATCGC GTTTCCCCTT
GAGCAGGCCG CTGCCCAAGC AGGCGCCCAA GTGGTGCCGC TATCGGCTGA GCAGGCGCGC
TCCCTCGGCG TGCGCTTCAG CCCAGTCGCC GCTGCTTCAG GGCTGGAGGT CGGCACGCAT
GCGCGTGTCG TTCTCAAGCC GGATGCGCAA TATGTGGTGG CCGCCCCATA CGGGGGCATG
GTGCCCCGGG TGTTGGTGTC GGTCGGGCAA ACCGTCCGGG CGGGCCAGCC GCTGGCCGGT
TTTTTGAGCC CGCAGCTCTT CGAAACCAGC CGCGCACTGA CGGAAGCCAA CTCGCAGGCG
CGGCTCGCGC AGCAATCGCT CGCACGCGAC AAGGCGCTGT ATGACGACGG CATCATCGCT
GCAAGCCGTT GGCAGGCAAC GCAGGCGAGG GCCGCTGAAG CCGGCGCCAT GGTCAAGGCG
AGGCGGGCAG AGCTGGCCTC CGCGGGCATC GCATTCAGCG GCCCGGTTGG TGAGGCGCAA
TTGGTTGCCA GCCGTGGCGG TGTGGTGTCC GAAGTCAACG CCGTTCCGGG GGCGCGCGTA
GAAGCGGCGG CACCCCTTTT CAGGATCGTT GACCCGGCCG CTCTGGAACT GGACCTGCTC
GTCGGCCGCG ATATACCGGT GCCGGCCACA GGTGACCGCG TCGAGGTCGC GCAACGCGGC
GCGGGGGGCT CGGTCATTGG TGTTGCGCCC TCCGGTGATG GCACTGCAGG CGTGCGTGTG
CGCGCATCGC TGGAGCGGCG TGGAGACCTG CGTGCCGGGG AGAGCGTCAA TGTCACGCTC
AAGCTGCGCG GCCAGGCCGA TGCAAGCGCC TCTGGCCTGC TGCGGGTTCC TGTGGCCGCG
TTGGTCTACG TGCGGGGCGT GCCAGGCGTG TTCGTCGCGA CCGATAAGGG CTTCCGCTTC
CAGGATGTCA CCGTCGCCAG TACAGACGAC GCCATCGCCA TCATCCGTGC CAACTTGCCA
GCCGGTACGC GCGTAGCGGT GACAGGTGTC GGTGCGCTCA AGGGCTTGCT GGCGGGAGAG
CAGTGA
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| Protein sequence | MSFKRIVAAS ACIALIAFPL EQAAAQAGAQ VVPLSAEQAR SLGVRFSPVA AASGLEVGTH
ARVVLKPDAQ YVVAAPYGGM VPRVLVSVGQ TVRAGQPLAG FLSPQLFETS RALTEANSQA
RLAQQSLARD KALYDDGIIA ASRWQATQAR AAEAGAMVKA RRAELASAGI AFSGPVGEAQ
LVASRGGVVS EVNAVPGARV EAAAPLFRIV DPAALELDLL VGRDIPVPAT GDRVEVAQRG
AGGSVIGVAP SGDGTAGVRV RASLERRGDL RAGESVNVTL KLRGQADASA SGLLRVPVAA
LVYVRGVPGV FVATDKGFRF QDVTVASTDD AIAIIRANLP AGTRVAVTGV GALKGLLAGE
Q
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