| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4487 |
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| Symbol | |
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| ID | 8022175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 1123611 |
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| End bp | 1124363 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644833261 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002984401 |
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| Protein GI | 241666042 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00027964 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGATTTG TATGGATTAC TGGAGCTAGC GGCGCTGTGG GCTCCGCCCT GGCACGTCGC
TTGAACAGCT CAGGCATTCC GCTGGTACTC ACAGCGCGAG ACCAGAAGAA GTTAGAACAG
CTCGCTGACG CGCTCCAGCC GGCCTCGGTT CTTGTCTGCC CGGCCGACGT CACAGACCGC
AGTAGCGCTC AGCTTGCTAT TGAAGCCGGT GTCACCCGAT TCGGCGCGCC GGCAGGCCTC
GCACACTGCG TCGGATCGAT CATCGTCAAG CCGCTCCATT TGACTTCAGA GGACGATCTC
AAGCAGGCGC TCGATGCGAA TTTCTTTTCG GCGTGGAATG CGTTGCGCTT GTTTGTGCAA
CAAGCCGTTC ACCAAAAAGT GCACGCAAGC GCGGTCTTAA TCGGCTCGGT TGCCGCCACT
GCCGGCTTCC CGAATCACGA GGCAATTGCT AGCGCGAAGG CAGCCGTCGC GGCGCTTGCG
CAGTCAGCAG CTGCAACGTA TGCAGATCGC AATATCCGCG TGAACTGCAT TCACCCGGGG
CTGACCTCGT CAGCAATGTC ATCTCGACTG ACAAGTGTTC CAACAGTTGC GGAGCGGCTT
GCAAAGGCAA ATCCGCTGGG CAGGCTCGGA CAAGGAGACG ATACCGCGGC GCTTGCGGAA
TTCCTGCTCA GCCCTGCAGC ATCCTGGATC ACCGGCCAAC AGATCGGCGT GGACGGTGGC
CACGGGCGAT TGGTCACACC ACCAAAGTCA TGA
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| Protein sequence | MGFVWITGAS GAVGSALARR LNSSGIPLVL TARDQKKLEQ LADALQPASV LVCPADVTDR
SSAQLAIEAG VTRFGAPAGL AHCVGSIIVK PLHLTSEDDL KQALDANFFS AWNALRLFVQ
QAVHQKVHAS AVLIGSVAAT AGFPNHEAIA SAKAAVAALA QSAAATYADR NIRVNCIHPG
LTSSAMSSRL TSVPTVAERL AKANPLGRLG QGDDTAALAE FLLSPAASWI TGQQIGVDGG
HGRLVTPPKS
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