| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4457 |
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| Symbol | |
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| ID | 8022145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1094929 |
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| End bp | 1096620 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644833231 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_002984371 |
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| Protein GI | 241666012 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.346578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00901661 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCCGG AAACCTCTCC GCATTGGCCG GCGCACCTTC CCCGTCATCT GACGCTGCCC
GCGACCAATC TGTACTTCAA CGCCGAGGTT TCGGCAGCCC GCTATCCGGA CAAGCCGTTC
ATCGTCTTCT ACGACACGCC CATCACGTTT GCGCAGTTCA AGGACGAGAC CGAAAGGATT
GCCGGCTATC TGCAGCAACA CTGCGACGTG AAGGCCGGAG ACCGCGTGCT GCTGTACATG
CAGAACAGCC CGCAATGGAT GCTCGCCTAT TACGGCATCC TGCGCGCCAA CGCCGTCGTT
GTGCCCGTCA ACCCGATGAA CATGACGGAT GAACTGCGTC ACTACGTAGA GGACGGCGGC
GCGCGCACGG CCTTCGTCGC GCAGAATTTG TACGAACGCA TCGCGCCGCT CGTCGGCGAT
GCTGATGGAC AGCTTGCGCA CACCATCGTC GCGACGTACA GCGATTACCT GAAGCAGCCA
TCCAGCATCA CGCCGCCGGA GTTCGTCAGT GCGCCACGCC ATATCAGCGG TGGTGACCAC
ATTGGCGTCA CGCATTGGAA CGACATGCTG GATGCGCGCG TTGCGCCAGG GCCACTGACC
GCAGGGCCGG ACGATCTCTG CGTGATGCCG TATACGTCGG GCACGACGGG CAAGCCGAAG
GGCTGCATGC ACACACACCG CAGCGTCATG TGCACCGCGC TCGGCGTGGT CAACTGGGCG
AGCGGCACGC AGAACTCGAT CCTGCTGTCG GTACTGCCGC TGTTCCATGT GACCGGCATG
CAGAGTGGGC TGAACGCGCC GCTGTTCAGC GGCGCAACCG TCGTCGTGCT GCCGCGCTGG
GATCGTGATG CAGTCGGTCG CGCGATCGCA CACCATCGGG TGACGGAATG GTGGTCCATC
TCCACCATGG CCGTCGATTT CCTATCGAAC CCGAAGCTCG ATGACTACGA CCTGTCGAGC
TTGCGTGTAG TGGCCGGCGG CGGCGCGGCG ATGCCGGACG CCGTCGCCAA GAAACTGCAT
GACAAGACCG GCATCGAGTA CATCGAAGGC TACGGCCTGT CGGAAACGAT CGCCCCGACG
CACATCAACC CGCCGCACCG GCCGAAGTCG AATTGCCTCG GCATTCCGAT CTTCGATGTC
GACGCCCGCA TCGTCGACCC GCAAACGCTT GAAGAGCTGC CGCAAGGCGA GACCGGCGAA
ATCGTGACGC ACGGCCCGCA GCTGATGCAA GGCTATTGGC GCAATCCCGA AGCCACGCGC
GAAGCGTTCA TCGAGATCGA CGGCAAGCGC TTTCTGCGCA CCGGCGACCT CGCCAGGAAG
GACGAGGATG GCTATTTCTT CATGGCGGAT CGCCTGAAGC GGATGATCAA CGCATCGGGC
TACAAGGTGT GGCCAGCCGA GGTCGAGACC ATGATGTACT ACCACCCGGC GATTCAGGAA
GTCTGCGTGA TTGCCGCGCG CGACACACAT CGCGGCGAGA CTGTGAAGGC GTTCGTCGTG
CGCAATGCAC GGCATACGCA AGCCGTGACC GAAGACGACA TCATCACGTG GGCCCGCGAG
AACATGGCGG CCTACAAGGC ACCGCGCATT GTTGAATTTG TCGAGTCATT GCCCAAATCG
GGCACCGGCA AGATCATGTG GCGCGAGCTT CAGGAGCAGG AAGCCGCGAA GGCCGCACGA
ACCGCAAGCT GA
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| Protein sequence | MPPETSPHWP AHLPRHLTLP ATNLYFNAEV SAARYPDKPF IVFYDTPITF AQFKDETERI
AGYLQQHCDV KAGDRVLLYM QNSPQWMLAY YGILRANAVV VPVNPMNMTD ELRHYVEDGG
ARTAFVAQNL YERIAPLVGD ADGQLAHTIV ATYSDYLKQP SSITPPEFVS APRHISGGDH
IGVTHWNDML DARVAPGPLT AGPDDLCVMP YTSGTTGKPK GCMHTHRSVM CTALGVVNWA
SGTQNSILLS VLPLFHVTGM QSGLNAPLFS GATVVVLPRW DRDAVGRAIA HHRVTEWWSI
STMAVDFLSN PKLDDYDLSS LRVVAGGGAA MPDAVAKKLH DKTGIEYIEG YGLSETIAPT
HINPPHRPKS NCLGIPIFDV DARIVDPQTL EELPQGETGE IVTHGPQLMQ GYWRNPEATR
EAFIEIDGKR FLRTGDLARK DEDGYFFMAD RLKRMINASG YKVWPAEVET MMYYHPAIQE
VCVIAARDTH RGETVKAFVV RNARHTQAVT EDDIITWARE NMAAYKAPRI VEFVESLPKS
GTGKIMWREL QEQEAAKAAR TAS
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