| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4449 |
|---|
| Symbol | |
|---|
| ID | 8022137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 1088178 |
|---|
| End bp | 1088909 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644833223 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002984363 |
|---|
| Protein GI | 241666004 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00437354 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.155961 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGA ACCTCATGAA TCTCTCCGAT ATGCCCTCCA CCGGTACCGG CTGGGATCGC
CTTGAAGCCG CCTTCAAGGA GGAGCGTCCC CTGCAGCCGA TCCGCAAGAT CGTCGTCAAA
GGCTCGGTCG ACATGGTGTT CCGGCGCGCG GACACGCCAA CGCTGGTCGT TGCCGGCGAA
ACGGCGGATG CGGTGACCTC GGTCCGGACC GCCTACAAAG GCGACAAACT GGTGATCGAG
CGCGAAGGCG TGTCGATCCG CTTCGGCAGC AGCCACATGA CCTTCCACGG CACGGTCGGC
TCGGTGGTCT TGGGCGACAT CGTGAACGGC AAGCCCACCG GGCCGGCCAT TTCCCTGCAC
CAGCCGCGCG CGGTGGTCGG CATCGCGCTG CCCGAGTTCC CGGCGATCAA GATCAAGGGC
AGCGGCGATG TCACCTTGCT CGATCTGCAG CAAGACGCCT TGGACCTGGA AATCCCGGGT
TCGGGCGATA TCACCGCCAG CGGCCACGTC GCCCGCTTGC ACGTGCAGGT CGTGGGCTCT
GGCGATGTCG ATGCCAGTGC GCTGATCGCC GAGTCGGCCG ACCTGTCGGT GGCGGGTTCC
GGCGACATTG ACGCCTTCGT GCGGACCGAG GTGCGCGCCC GCGTGGCCGG CTCGGGTGAC
ATCGTCGTGC GGGGCAACCC GCTGCGCTGG GACGACCACG TGGCTGGCTC CGGCACGATC
AAGTTTCGTT GA
|
|---|
| Protein sequence | MTPNLMNLSD MPSTGTGWDR LEAAFKEERP LQPIRKIVVK GSVDMVFRRA DTPTLVVAGE
TADAVTSVRT AYKGDKLVIE REGVSIRFGS SHMTFHGTVG SVVLGDIVNG KPTGPAISLH
QPRAVVGIAL PEFPAIKIKG SGDVTLLDLQ QDALDLEIPG SGDITASGHV ARLHVQVVGS
GDVDASALIA ESADLSVAGS GDIDAFVRTE VRARVAGSGD IVVRGNPLRW DDHVAGSGTI
KFR
|
|---|
| |