| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4370 |
|---|
| Symbol | |
|---|
| ID | 8022058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 996213 |
|---|
| End bp | 997367 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644833145 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_002984285 |
|---|
| Protein GI | 241665926 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.999516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.460819 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCG CTTCTCATGA GGCTGAACGT GAGCCGCAAG TCGCTCCCGC CCGCACCGTT
CAGAGCCCGG TGCGTTATGC CGTGGTCGGC GCCGGGTGGA TTTCCCAGGC CGCATTTCTG
CCGGGCGTGG CGCAAAGCGG CAATTCCGTC GTCACTGCGC TGGTCACCGG CGATGAGGCC
AAGGCCACCG TACTGGCCGA CCGCTACGGC ATCGAGCACG TTCACGGCTA TGCCGATTAC
GACCAGTTGC TCGCCGCTGG CGATATCGAC GCAATCTACC TCGCGCTGCC AAACGACATG
CATCGGCAGT ACGCCCTTCC GGCCCTGCAG CGCGGCATCC ACGTCCTCCT TGAAAAGCCC
ATGGCCACCA GCGAGGCCGA TTGCGAAGCG ATGATCGAAG CGGCCCGCAA CGGCAATGCA
AAATTGATGA TCGCCTACCG CCTGCATTTC GAGCCGGCCA CACTGGCCGC CATCGAACTC
GTGCGCGCAG GCAAACTTGG CCGCATTCGA GCGTTCTCGG CCATGTTCAG CCAATCGGTG
GCGCCGTCCA ACCACCGCGC CAGCCACGGC TATTGGGCCG GGCCGGTGTC CGACATGGGC
GTCTATCCCA TCAACGCGGT GCGCAACCTC TTTGGCGAAG AGCCGGTAGA GGTGTCGGCC
TGTGGGGTTC GGGACCCGGA TCTGCCCTTC AACTTCGATG ACACTGTCAG CGTGACGCTG
CGCTTTGCCG ACCACCGCGT CGCACAGTTC GTGGTCAGCT ACAGCGGCGC GAACATCGAC
CAGTACCGCA TCCTGGGGAC CAAGGGGGAT CTGGAGGTCT CGCCCGGCTT CATGTTTGGC
GTGGGCCTGA AGTACCGCGC CACGATCGAC GGCAAGACGC ACGAACAGGC GTTCGACGCG
ACCGACCAGT TTGGCGGCGA GCTGCAGTAC TTCTCCGACT GCATCCTCAA CAACCGGGAA
CCTGAACCCA ACGGCGAAGA AGGCTTGGCC GACGTGCGCG TCCTGGCCGC CATTGAGCGC
GCGCTGGAAT CAGGACAGCC GCAGAACCTT GGGCCGTTCC AGCGTCAGGG CCGCATGGAG
ACTGCGCAGG TGCGCAAGCT GCCACCCGTG CCCGCACCGG AACTGGTGGA CGCGGCTGAA
CCCAGCAAGG GATAG
|
|---|
| Protein sequence | MNTASHEAER EPQVAPARTV QSPVRYAVVG AGWISQAAFL PGVAQSGNSV VTALVTGDEA
KATVLADRYG IEHVHGYADY DQLLAAGDID AIYLALPNDM HRQYALPALQ RGIHVLLEKP
MATSEADCEA MIEAARNGNA KLMIAYRLHF EPATLAAIEL VRAGKLGRIR AFSAMFSQSV
APSNHRASHG YWAGPVSDMG VYPINAVRNL FGEEPVEVSA CGVRDPDLPF NFDDTVSVTL
RFADHRVAQF VVSYSGANID QYRILGTKGD LEVSPGFMFG VGLKYRATID GKTHEQAFDA
TDQFGGELQY FSDCILNNRE PEPNGEEGLA DVRVLAAIER ALESGQPQNL GPFQRQGRME
TAQVRKLPPV PAPELVDAAE PSKG
|
|---|
| |