| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4344 |
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| Symbol | |
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| ID | 8022032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 963139 |
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| End bp | 964119 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644833119 |
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| Product | integrase/recombinase protein |
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| Protein accession | YP_002984259 |
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| Protein GI | 241665900 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.509087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCTCAT TCACGCCGCC CGCCACGCCC GTTCCGGACC TGTTTGAGCC CAGCCTGCAA
GACTGGGCCG AGCGGCCCGC GCAAGCCTTC GAACATTGGC TGGCCGCGCG AGGCTATCGC
GAATCGTCGG CGACGGTGTA TCGCGCGATG TGGCGCAAAT GGCTGCGCTG GGCCGAGTCG
CATCAACGCG CCTTGGCCAA CTGGAGCGCG GGCGACATCG CCGCCTTTCT TGATGAATCG
GGTCTGACCA AGCTGCATCG CTACCGCTAC GCGCGCCTGA TCGAACGCGT CTTCCATCAG
ATCGAGCAAC AACGCACGGG CACGCACAAC CCTGCAAGCT CGGCGGTGCA GCAGAAGTTG
GCGGAAGGCG AAAACGATCC GACCACGTTT CTCTCCTTTG CCGAGCGCGC GGCGATCGAG
GCTTCCCTCG AGGTGGACGC GCAGGCCAGC GAGGCCGCCG CCAATGCCAG CGCGTTCAAG
CTGGCGCGCG ACCGCGCACT CGTTGCGGTT TGCCATGGCG CGGGGTTGAA GGTCGCGCAG
GTGCAATCGT TGCTGCTCCG CCAGGTGGAT GCGGCGCTTG AGGCGATCGT CGTCGAGCGC
CCGCGCGGCC CGTCGTACAA GGCGCCCATG CTTGAAGCTG CACGCCCCGC GATGGCGGCC
TGGCTGGCGG TGCGCGCACA CGCAGAGGTG CCGGGCGAGC GCGTGTTCGT TGCCGATGCC
GGCGGGCGTG TCATGCACGC AGCGTCGGTG TACCGGCGCG TGGAGGCCTG GCTGGCTGCG
CTGCCGGCGT TGTTGCACCG CAGCGAGCGG CTGTCGCCGC AGACGCTGCG CAATGGCTAC
ACCGCCGCGC TGTTCGACGC AGGCGCAAAC CCTGCCGAGG TGGGGTACGC ACTGGGCCTG
CGCGATGCGA CTTCGGCATG GCGTCTGCGC GCAGCCTATG CTGAGTGGCA GGCGGCCGCC
CATCCAGATG GCCAGCCGTA G
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| Protein sequence | MTSFTPPATP VPDLFEPSLQ DWAERPAQAF EHWLAARGYR ESSATVYRAM WRKWLRWAES
HQRALANWSA GDIAAFLDES GLTKLHRYRY ARLIERVFHQ IEQQRTGTHN PASSAVQQKL
AEGENDPTTF LSFAERAAIE ASLEVDAQAS EAAANASAFK LARDRALVAV CHGAGLKVAQ
VQSLLLRQVD AALEAIVVER PRGPSYKAPM LEAARPAMAA WLAVRAHAEV PGERVFVADA
GGRVMHAASV YRRVEAWLAA LPALLHRSER LSPQTLRNGY TAALFDAGAN PAEVGYALGL
RDATSAWRLR AAYAEWQAAA HPDGQP
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