| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4173 |
|---|
| Symbol | |
|---|
| ID | 8021861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 775906 |
|---|
| End bp | 777201 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644832953 |
|---|
| Product | periplasmic copper-binding |
|---|
| Protein accession | YP_002984093 |
|---|
| Protein GI | 241665734 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3420] Nitrous oxidase accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTGGC TGCCGGTGTT GCTCGTTGTC TGCGGCTGGC TTGCGGCTGT GCAGGGCGCT
CACGCATCGG CGGCCACCAC GGTGCGCGTT GCGGCGGGGC AGTCGCTGCA AGCAGCCATC
GACGCAGCAC ATCCGGGCGA TGTGCTTGAG ATCGAGCGCG GCACGTATAC CGGCAACCTC
ATCGTCAACA AGCCTCTGAC GCTGCGCGGA CTCGATCGTC CCACGCTCAG CGGCGGCCAG
CGCGGCGACA CGATCCGCAT CGGCGCACCG GACGTCGTGA TCGAGGGCCT GATCGTTCGC
GATTCGGGCG ACAGCCTGAA AGAGCAGAAC GCAGGCATCA ACATCCTGCC CGGCGCGCAT
CGCGCCGTGG TGCGCCAGTG TGAGCTGACC TACAACCTGT TCGGTCTGTG GATCGAGAAA
GCCAACGACG TGCGCATCGA GGCCAACACC ATCACCGGCA AGCGTGACTA CAACTCGGCG
CAGCGCGGCA ATGGCGTGGA GCTGTACAAC ACGCAAGGCG CGCGCATCAT CGGCAACAAC
ATCAGCTTCG TACGGGATGC GCTTTACGTG GACGTGTCGC ACCACGCCGT TTTCAAAGGC
AATCGGCTCC ACCACAGCCG CTATGGCACG CACTACATGA ACTCCTACTA CAACCTGTGG
GAGGACAACG ACAGCTATGC CAACCGGGGC GGCCTGGCCT TGATGGAGGT GCGCGACCAG
ATCGTGCGCA ACAACCGCAC CTGGGGCAAT GCCGACCACG GGATCATGCT GCGCACGTTG
CAGGACTCGG TGGTGGAGAA CAACGTGGTG GCCGACAACG ACCGCGGCTT CTTCATCTAC
GACGTGGAAT ACACGCAACT GCGCGGCAAC CTCATCGTCG GCAACCAGGT GGGCGTGCAC
CTGTCGGCAG GCTCGACACG CAACGTCGTG CAAGGCAACG ACTTCATCGG CAACCGAGAG
CAAGTCCGCT ACGTGGGCGC GCGTGACGAG GCATGGGGGG CACGCACGGC TGCCGAGCGC
GCGCAGGGCA ACTTCTGGAG CGACTACCTG GGCTGGGACC GCGATGGCGA TGGCATCGGC
GATGTGCCCT ACGAGGCCAA CGACGTTGTC GACCGGCTGA TCTGGCGTCA CCCCGGCGTG
CAACTGCTGT TGGCGAGCCC GGCGGTGCAG GCACTTAGAT TCGTCAGCCG GCAGTTTCCC
ATCCTGCGTG TGCCGAGCGT GGTGGACGCG TATCCGCGCA TGCAACCCGC GAACCCACAT
TGGAGCACCT GGCGTGACAG ATCCCCTTCA CGTTGA
|
|---|
| Protein sequence | MRWLPVLLVV CGWLAAVQGA HASAATTVRV AAGQSLQAAI DAAHPGDVLE IERGTYTGNL
IVNKPLTLRG LDRPTLSGGQ RGDTIRIGAP DVVIEGLIVR DSGDSLKEQN AGINILPGAH
RAVVRQCELT YNLFGLWIEK ANDVRIEANT ITGKRDYNSA QRGNGVELYN TQGARIIGNN
ISFVRDALYV DVSHHAVFKG NRLHHSRYGT HYMNSYYNLW EDNDSYANRG GLALMEVRDQ
IVRNNRTWGN ADHGIMLRTL QDSVVENNVV ADNDRGFFIY DVEYTQLRGN LIVGNQVGVH
LSAGSTRNVV QGNDFIGNRE QVRYVGARDE AWGARTAAER AQGNFWSDYL GWDRDGDGIG
DVPYEANDVV DRLIWRHPGV QLLLASPAVQ ALRFVSRQFP ILRVPSVVDA YPRMQPANPH
WSTWRDRSPS R
|
|---|
| |