Gene Rpic12D_4109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4109 
Symbol 
ID8021797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp711665 
End bp712216 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content71% 
IMG OID644832890 
Productalanin-rich signal peptide protein 
Protein accessionYP_002984030 
Protein GI241665671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.238137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGT CTGCGTTGAT GTTTTCAATC GGTGCGCTGG TGATGGGTTC AGCGTTTGCG 
CAGGGCACCG CCGCACCCGC CACCGCACCG GCAGCGGCCC CGGCAGCGGC CCCGGCGGCC
GTCCACGCGG TCTGCAAGGA CGGCACGCCC TATAGCGGCG CGACGCTCAA GGGCGCCTGC
CGCGGCCACG GTGGTGTCGA CAAGAAAGCC AGCGCAGGCG GTGCTCCGGC TGCCGCGCCC
GCAGCGGCGC CTGCCGCATC GGCTCCGGCC AAACCTGCGG CCGCGGCTCC TGCGGCGCCT
GCCGCAGCAC CGGCTCCGGC GCCAGCAGCC AAACCCGCAG CAGCAGCGCC TGCCAAACCG
GCCGCGGCCG CAGCGGCCAC CGTTGCCCCT GGCGGCGGCC CCGACAAGGT ATGGGCCAAT
GCCAGCACCA AGGTCTACCA CTGCCCGGGC GATCGCTACT ACGGCAAGAC CAAGCAAGGC
GAATACATGA CCGAAGCCGA CGCCAAGGCC GCCGGCATGC GCCCAAGCCG CAACAAGGCC
TGTACCAAGT AA
 
Protein sequence
MKLSALMFSI GALVMGSAFA QGTAAPATAP AAAPAAAPAA VHAVCKDGTP YSGATLKGAC 
RGHGGVDKKA SAGGAPAAAP AAAPAASAPA KPAAAAPAAP AAAPAPAPAA KPAAAAPAKP
AAAAAATVAP GGGPDKVWAN ASTKVYHCPG DRYYGKTKQG EYMTEADAKA AGMRPSRNKA
CTK