| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4034 |
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| Symbol | |
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| ID | 8021722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 607769 |
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| End bp | 609403 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644832816 |
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| Product | peptidase dimerisation domain protein |
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| Protein accession | YP_002983956 |
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| Protein GI | 241665597 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.957672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAAA AGGTGTGGTA TGCGCACACT CACCCGGAAC TGTTCGACCA GCGGAGTGTC
CAGATGCCCC TTCAGCCAGC AGCCCGTCAA ACTACTGCGC ACCGCGCGTC GCATCGCCTC
CGGGTCCTCG TGCCGGCTCT CATGCTGGGT GCCACTGGCC TGGCCGGCGC CGCTGAACTG
TCTTCGGCAG ACGCCGAACG CCATGCCCAG GCAACGTACC GCGAATACTT TCAACTGCTC
TCCCTGCCCA ACGACGCCAT CGTGCCGGAG GATGTCCGCA AGAATGCCGA TTGGCTGGAG
CAGGCGTTCC GCAAGCGCGG CTTCACAACA AAACAGTTGG CGAACAACGG CAAACCGATG
CTCTACGCCG AGCTGCCGAA CCCGGATGCC GGACGCAAGA CGGTGCTGTT CTACATGCAC
CTCGACGGCC AGCCAGTGAT TCCCGCGCAG TGGGCGCAGA AGAGTCCATG GACGCCCGTG
CTCAAGCACA AGACCGCACA AGGCGACTGG GAAGAGATCG ACGCGGCGCA GCTTTTCAGC
GGCCCACTGG ATCCGGAATG GCGCGTATTC GGCCGATCGT CCGCCGACGA CAAGGGCCCG
ATCATGATGA TGCTGGCCGC CATCGACGCA CTGAAGGCCA GCGGCGCCCA GCCGGCCGTC
AACGTCAAGA TCATTCTCGA CAGCGAGGAG GAGAAAGGCT CGCCGTCGAT CAGCAAGGTC
ATGCAGGCAA ACCGCGAGCT GCTGCGCTGC GACGCCATCG TCATCCACGA CGGCCCCATG
CATGCGAGCA ACCTGCCAAC GCTGGTCTTT GGTAACCGCG GTGCAGCCGA AGCGAGGCTC
ACCGTCTACG GGGCCAAGGT GCCGCTGCAC AGCGGGCACT ACGGCAACTA CGCCCGCAAT
CCGGCCCAGC AGTTGGCCAA CCTGCTGGCA TCGATGAAGA ACGACGCGGG CCGCGTGACG
GTGCCAGGCT ATTACGACCA CGTGAAGATC AGCGAGGCCG ACCGCAAGAT CATGGCTGCC
GTGCCCGACG ACCAGGCAGC GCTCAACAAG CGCCTGGGCA TTGCGCATGC CGACAAGGTC
GGGGCCAACT ACCAGGAAGC GATGCAGTAC CCGTCATTGA ACGTGCGCGG CATGGCCTCT
GCAGCGGTGG GCGACAAGGT GGCGAACATC GTGCCCGACA AGGCCGTCGC CGAACTGGAC
CTGCGAACCA CGCCAGACTC CAGCGCGGCC TACCTCGGCA AGCTGATCGA GCGGCACATC
GAGCGCCAGG GCTACCACCT CGTCAAGAAC GCCCCGACCG ACGAAGAGCG CAGCCGCTAC
GACAAGCTCG CCACGTTCAC GTATCAGAGC GAGGGCGCGG ATGCCGCGGG TTCACCGATC
GACTCGGCTG TGGGCACATG GGCCTACAGG TCGCTGACCG ACACCTTTGG TGCGAACCCG
GCGCCGGTCC GCATCCGCAT GATGGGCGGG ACGGTGCCCA CGGCGGAAAT CGTTGGCGTG
CTGCAGGTGC CGTTCGCGAT CATTCCTCTG GTCAATGCCG ATAACAACCA GCATGCCGCG
AATGAGAACC TGCGGATGGG CAACTACGTG GGCGGCGTGC GGACGATCTA CGGCCTGCTG
ACGCACCCGC TCTGA
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| Protein sequence | MVKKVWYAHT HPELFDQRSV QMPLQPAARQ TTAHRASHRL RVLVPALMLG ATGLAGAAEL
SSADAERHAQ ATYREYFQLL SLPNDAIVPE DVRKNADWLE QAFRKRGFTT KQLANNGKPM
LYAELPNPDA GRKTVLFYMH LDGQPVIPAQ WAQKSPWTPV LKHKTAQGDW EEIDAAQLFS
GPLDPEWRVF GRSSADDKGP IMMMLAAIDA LKASGAQPAV NVKIILDSEE EKGSPSISKV
MQANRELLRC DAIVIHDGPM HASNLPTLVF GNRGAAEARL TVYGAKVPLH SGHYGNYARN
PAQQLANLLA SMKNDAGRVT VPGYYDHVKI SEADRKIMAA VPDDQAALNK RLGIAHADKV
GANYQEAMQY PSLNVRGMAS AAVGDKVANI VPDKAVAELD LRTTPDSSAA YLGKLIERHI
ERQGYHLVKN APTDEERSRY DKLATFTYQS EGADAAGSPI DSAVGTWAYR SLTDTFGANP
APVRIRMMGG TVPTAEIVGV LQVPFAIIPL VNADNNQHAA NENLRMGNYV GGVRTIYGLL
THPL
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