| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4029 |
|---|
| Symbol | |
|---|
| ID | 8021717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 603212 |
|---|
| End bp | 604309 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644832811 |
|---|
| Product | lipopolysaccharide-modifying protein |
|---|
| Protein accession | YP_002983951 |
|---|
| Protein GI | 241665592 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.030521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCACT CATTTCTGCG GGTGGGGGCT ACAGCTTTTC GCCCGAAAAG CGACACCCTG
GGTTTAAATT TCCGCGGCAT CTTTTGTTTC ATGCGTCATC TCAAATACCG CTTGAGCAGA
GTCTCTGCAA AAAAATTCTG GTATTACTTT TCGAATGCCT CTAACCATTT TCTCGCGCGT
GCTACAAAAA ATGGAAAAGC TGAGACGCTT CTGAAAAGAA AAAGTGGTCA GCGTCGTACG
CAGGACGTCT TCGATCGATT GAGCTATTAC AACTCAATTT CGGAGGCATT CGACACCAGT
TGCAATGCCG TGGAATATTC AAATTTCTTG TTGAAATCCT CAACAAGCAC CATCGTCGAC
AAGCATTGTG AAATAGGGAG TACCTATTTC TATGATCTGG TCGACCTGAT GGATTATTTT
GGTCCGGGAT ACAGCTTTGA CTACGACTGC GGGGATGTGA CTGTCGAGCC GAACCACCCG
GCGTTCGTAA AAAGCCGCCC GATCAAGAAC AGCTCCCATA ATGGCATTCT CTTGAAGCTC
GACGCCATCC GGCATTTTTC GCTGGCACGC GACCCCATCG ATTTCCAAGA CAAGAAGCCC
ATGGCGGTCT TTCGGGGGCC GTGCCATCAG GAACACCGCA GGGCGTTTGT GGAGCGATGT
CATGACCTGG CAAACGTTAA CATCGGGGAT ACTCGAAAAT CAGAACTTGG GAAAGCGACT
TACAAATCGC CGATGACGAT TGCGGAGCAA TTGCAATACA AATTTATTGT GAGTGTCGAG
GGAAACGACG TTGCAACGAA TTTGAAATGG ATCATGGCGT CCAATTCGCT GTGCTTCATG
AGGCGGCCCC GGTATGAGAC GTGGTTCATG GAAGGAAGGT TGATCCCGGA CGTGCATTAT
GTCCTTCTGA AAGATGATTA TTCCGACCTC CAGGAGAAAA TTGAGCATTA CCGGAAATAC
CCTGGCGATG CATTGGCGAT CGTCCGCAAC GCCAATCGGT GGGTGGCGCA ATTCATGAAC
CGTGACCAGG AACGCCTGCT CGGTTTGATG GTGATCGCAA AGTATTTCCG GTTGTCGGGC
CAACAGTCGT TTTGGTAA
|
|---|
| Protein sequence | MCHSFLRVGA TAFRPKSDTL GLNFRGIFCF MRHLKYRLSR VSAKKFWYYF SNASNHFLAR
ATKNGKAETL LKRKSGQRRT QDVFDRLSYY NSISEAFDTS CNAVEYSNFL LKSSTSTIVD
KHCEIGSTYF YDLVDLMDYF GPGYSFDYDC GDVTVEPNHP AFVKSRPIKN SSHNGILLKL
DAIRHFSLAR DPIDFQDKKP MAVFRGPCHQ EHRRAFVERC HDLANVNIGD TRKSELGKAT
YKSPMTIAEQ LQYKFIVSVE GNDVATNLKW IMASNSLCFM RRPRYETWFM EGRLIPDVHY
VLLKDDYSDL QEKIEHYRKY PGDALAIVRN ANRWVAQFMN RDQERLLGLM VIAKYFRLSG
QQSFW
|
|---|
| |