Gene Rpic12D_4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4018 
Symbol 
ID8021706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp595373 
End bp596155 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID644832800 
Productprotein of unknown function DUF81 
Protein accessionYP_002983940 
Protein GI241665581 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.006188 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTC ACGCGGTTTT CACGGGCCTG ATCAATTTGC TGCTCGGCAT GGGTCTCGGC 
GTGGCGGGCG GTTTGCTCGG CATTGGAGGC GGGCTCATCG CCATTCCTCT GCTCGGCTAT
CTGTACGGAA TGGACCAGCA CTTGGCGCAG GGCACGGCGC TGGTGATGAT TGCGCCCAAT
GTGCTGATCG GCTTCTGGCG GTATCACCAG CGGCATCCGG TGCATGTGCG TTCCGTCGCG
CTGATCTGCG TGTTCTCGAT GGGGGCGACC TACGTTGCCG CGCGCTTTGC GGCGGGGCTG
GACGCCAACC TGCTGCATAC GGCGTTTGCC GTATTCCTGA TCGTGCTCGC CGTGTACTTT
GCCTCGCAGC TCAAGGAGAA GCCGAATGCC GCTGGTGCTG CGCACGCTGT GCCGCACACC
ATGCCGGCCG CCGCGCTGCC GTTGATGGGC ATCGCCAGCG GCGCGATGTC GGGCATCTTC
ACGGTGGGGG GCGGGCTGGT GGTGGTGTCG GCGCTGGTGA CGTTCTTCGG CATGCCGCAG
ACGCGCGCGC AGGGCATGGC GCTCGCGCTG GTGGTGCCAG GCTCGCTCAT TGCACTCGCC
GCGTATGCGC ATGCGGGCCA CGTGGATTGG GGTACGGGCA TTCCGCTGGC GGCCGGCGGT
GTTGTCAGCG TGTCGTGGGG TGTGGCCCTG GCATATCGGT TTTCAGCGCG GCGTTTGCGG
CTGGCGTTCT GCGCAGTGCT GCTTGGTACG GCGCTGATGA TGTTGCTGGT CAAGCCAGCC
TGA
 
Protein sequence
MTSHAVFTGL INLLLGMGLG VAGGLLGIGG GLIAIPLLGY LYGMDQHLAQ GTALVMIAPN 
VLIGFWRYHQ RHPVHVRSVA LICVFSMGAT YVAARFAAGL DANLLHTAFA VFLIVLAVYF
ASQLKEKPNA AGAAHAVPHT MPAAALPLMG IASGAMSGIF TVGGGLVVVS ALVTFFGMPQ
TRAQGMALAL VVPGSLIALA AYAHAGHVDW GTGIPLAAGG VVSVSWGVAL AYRFSARRLR
LAFCAVLLGT ALMMLLVKPA