| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3978 |
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| Symbol | |
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| ID | 8021666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 560907 |
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| End bp | 562253 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644832766 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002983906 |
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| Protein GI | 241665547 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGAAA ACAATCCCTC GGAGACCGCC CGGCACGCCC TCAAGCTGCT GGCCTCACGC
AGGTTGGCGC CCACGCCAGA CAACTTCGCC TCGATCTATT ACGAAATCGC CGGCAACAAG
CCCGACGCAG ACCCCCCGGA TGCCGAGCGG ATGGCGCTCG TGCGTGAGTT GCGCGAGCAG
CTTGCGCGCA CGGTCGAATG CTGTCTGCCA GTGCTCGGTG AAGACGATGC CAGCATCGGC
CCCGCGGCCT GGGCGCTGAT CCGGGCCTGC CGGTCCGAAT TCGAAGGCCT TGGCAGTTTG
AACGGCAAGC TCTCGACGTT CAACCACTGG CTGTCGCTGG CGGCCGAAGA CCAGAGCGAG
ATCCGCAGGG CATTGCTGAG CCTGCTGCAA CTGGTGTTTG AGAACATCGC CGAGCTGTCG
TTGGACGACC GTTGGCTGCG CGGCCAGATC GAAGCCCTGA TGAAGGCCAG CGAGGCCCCC
GTCAGCCTGC GCCGGCTGGA CGATCTGCGG CGCCGCCTCA TGGAGGTGAT CCAGAAGCAA
AGCTCGCTGA AGTCGAAGTC GATCGAAGCC CAGGAAGAAA TGAAGCGGCT GCTGGCCGCC
TTCATGGAGC GCCTGTCCGT TGCCGCAGAA ACCTCGGGCG AGCATCACCG CCAGATGGAA
GCCTGCGCCA AAAAGATTGA ATCGGCCAAC AGCATCGCCG AGATTGCGCC GGCCATTCAG
GATGCGCTGT CGGCCACCCG CTGGATGTCG CTGGAGTCGG CCCGCAACCG CGACGTGCTG
TCGGCGATGA AGGTCAAGGC CGAAGAGGCC GCCGCCGAGG TGGCGCAACT GCGCAAGGCG
CTCGACATGG CATCGGCGTC GGCGCGTCAC GACCTGCTGA CGGGCGCGCT CAACCGCAAG
GGTCTGGAAG AGGCGCTGGA GCGCGAAGTT GCCCGCGCGG CCCGCCAGAA CACGGCACTC
TGCATCGCGT TCCTGGACAT CGACGACTTC AAGGCGATCA ACGATACGCA CGGCCACAGC
TTTGGTGACG ATGCGCTGTC GCACCTGGCC CAGGTGGCCC GCGAATCGAT GCGCCCGCAA
GACACGCTCG CCCGCTTTGG CGGCGAAGAA TTCGTGATCC TGATGCCGGA CACGTCGCTG
GAAGAGGGCG TGCAGACCAT CGTCCGCCTG CAGCGCGCGC TCACGCAGCG CTTCTTTGCG
GCGGGCGATA CGCGACTGTT CATCACCTTC TCTGCCGGGG TGGCGGAAGT CGGTAAGAAC
GAACCGCCCA TGGCAGCCAT CCAACGCGCC GACCGCGGCA TGTATCAGGC CAAGCGCGCC
GGCAAGAACA AGGTGGTCAG CGTCTGA
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| Protein sequence | MIENNPSETA RHALKLLASR RLAPTPDNFA SIYYEIAGNK PDADPPDAER MALVRELREQ
LARTVECCLP VLGEDDASIG PAAWALIRAC RSEFEGLGSL NGKLSTFNHW LSLAAEDQSE
IRRALLSLLQ LVFENIAELS LDDRWLRGQI EALMKASEAP VSLRRLDDLR RRLMEVIQKQ
SSLKSKSIEA QEEMKRLLAA FMERLSVAAE TSGEHHRQME ACAKKIESAN SIAEIAPAIQ
DALSATRWMS LESARNRDVL SAMKVKAEEA AAEVAQLRKA LDMASASARH DLLTGALNRK
GLEEALEREV ARAARQNTAL CIAFLDIDDF KAINDTHGHS FGDDALSHLA QVARESMRPQ
DTLARFGGEE FVILMPDTSL EEGVQTIVRL QRALTQRFFA AGDTRLFITF SAGVAEVGKN
EPPMAAIQRA DRGMYQAKRA GKNKVVSV
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