| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3908 |
|---|
| Symbol | |
|---|
| ID | 8021595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 484438 |
|---|
| End bp | 485346 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644832696 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002983837 |
|---|
| Protein GI | 241665478 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATGGT TCGACAATTT CTGGTCGGTC TACAGCAATC TGGTGCTCAC GCTCGGCATC
AATGCGCTGC TGGCGCTGTC CATCTACCTG ACGCTGTCGT GCGGCTTGCT GGCGATGGCG
AATGCGGCCT TCATGGGCAT CGGCGCCTAC ACGGCGGCGC TGCTGACGAT GAACGCCGAG
ATGCCGTTTT CCGTCGCGCT GTTGGGCGGC ATGGTGGCGC CGGCCGTGGT GGCCGTGGTC
ATCGGGCGGC CCACGCTGCG TCTTTCCGGC GTGTATCTGG CCATGGCCAC GCTTGGTTTT
GGCGAAGTCG TGCGCGTGCT GATCCTGAAC ACCGAAGACT GGACCGGCGG CGCGCTGGGC
CTGAACGGCA TTCCGCAGCT GACCGAATGG TGGCATGTGG CGTTGGCCGT GGCGCTGACG
ATGTTCGTGC TCGCACGCAT GCGCCGCTCC AAGGTTGGCC GCGCATTCGA AGCCATCAAG
GAAGATGAGA CGGCTGCGGG TCTGATGGGT ATCAACGTGG CCGGCACGAA GCTGCTGGCG
TTCACGCTGG GCGCCGTCAT CGCCGGGCTC GCGGGCGCGC TCAACGCGCA TCTGACCTTC
TTCATCGGCC CGAACGAATT CGGCTTCGAC CGCGGCGTGG AAATCCTCAC GATGACGATC
CTGGGCGGCA CGAACGGCCT GACGGGCCCG GTGCTCGGCA GCCTGATCCT GTCGCTGCTG
CCCGAGTTGC TGCGTGCGTT CAAGGATTTC CGCCTGGTCG TCAACGGCGT GATCCTGATG
GTGATCGTGC TGTTCCTGCC CAAGGGCATC TGGGATCCGG CGCGTTTCGC GCGCTGGTTC
GGCATCAAGC GCGGCGGCAC CATGCCGGGC ACGGGCAACA CCCCGGCTGC TTCCAATGAA
TCGCACTGA
|
|---|
| Protein sequence | MEWFDNFWSV YSNLVLTLGI NALLALSIYL TLSCGLLAMA NAAFMGIGAY TAALLTMNAE
MPFSVALLGG MVAPAVVAVV IGRPTLRLSG VYLAMATLGF GEVVRVLILN TEDWTGGALG
LNGIPQLTEW WHVALAVALT MFVLARMRRS KVGRAFEAIK EDETAAGLMG INVAGTKLLA
FTLGAVIAGL AGALNAHLTF FIGPNEFGFD RGVEILTMTI LGGTNGLTGP VLGSLILSLL
PELLRAFKDF RLVVNGVILM VIVLFLPKGI WDPARFARWF GIKRGGTMPG TGNTPAASNE
SH
|
|---|
| |