| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3906 |
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| Symbol | |
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| ID | 8021593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 482286 |
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| End bp | 483446 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644832694 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002983835 |
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| Protein GI | 241665476 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA CGATCAAACG GCTGCTGGTG ACGGCGGCGG CTGCGGGGGC GGCTATCGCA
ACGGGCACGA CGTTCGCGGC CCAGGACATC AAGATCGGCG TGGCCGAGGC GCTGTCGGGC
GGTGCAGCCC AGTACGGCGT GGCCATCCGC AACGGCTTCC AGCTGGCCGC TGATGAGATC
AATGCCGCGG GCGGCATCAA CGGCAGCAAG ATCGCGCTGG TGATCGAAGA CGAGCAGGGC
AAGAAGGAAG AGGCCATCAA CGTTTTCAAG AAGCTGATCT TCCAGGACAA GGTCGCCATG
GTGTTCGGCC CCACGCTGTC CAACTCGGCA CAGGCAGCGG ACCCGATTGC GCAGGGCGCC
AAGACGGTCG TGTTCGGCAC CTCCAACACC GCTGACGGCG TCACCAGCAT CGGCGATTTC
GTCTTCCGCA ACTCCGTGAC CGAAGCCGAC GTGCTGCCGG CCACCATCCA GACTGTCGTG
AAGAAGGCGG GCGTGAAGAA GGTCGCGGTG CTGTACGGCA ACGACGACGT CTTCACCAAG
AGCGGCTACG ACAACTTCAA GAAGGCGCTC GAAGACCTGA AGATTCCGGT CACGACCACC
GAGACCTTCG CCAAGGGCGA CGTGGACTTC AAGGCCCAGC TCACCAAGAT CAAGGCGACG
AATCCGGATG CGATCGTGCT GTCGGCCCTG ATTGCGGAGG GTGGCCCGAT CATGGTGCAG
GCGCGTCAGC TTGGCCTGAA CGTGCCCATC ATCGGCGGCA ATGGCATGAA CTCGGTCAAG
GTGTTCGACC TGGCCAAGGA CAAGTCCGAC AACCTGTGGG TGGGCAGCCC GTGGTCGATC
GAGAACCACA CGGCCGAGAA CAGCAAGTTC ATCACCGCCT ACACCGCCAA GTACAAGGCA
GCGCCGGACC AGTTCGCCGC GCAGGCGTAT GACGCCATGT ACATCGCGAG CAAGGCGCTG
AAGACGGTCA AGTTCAGCGG CAAGCTGGAA GCCGACCGCA AGGCGATCCG CGATGCGCTG
CCGGGCGTCA AGCACATCGG CGCAACCGGC GCGTTCGCAT TCCGCCAGGT GACGGCGCGC
GGCAAGCCGG CTGGCTACGA CGCTGTGCAG ACGCCGATCG TGAGCGTGAC CAAGAACGGC
AAGTACACGA TCGAGAAGTA A
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| Protein sequence | MQKTIKRLLV TAAAAGAAIA TGTTFAAQDI KIGVAEALSG GAAQYGVAIR NGFQLAADEI
NAAGGINGSK IALVIEDEQG KKEEAINVFK KLIFQDKVAM VFGPTLSNSA QAADPIAQGA
KTVVFGTSNT ADGVTSIGDF VFRNSVTEAD VLPATIQTVV KKAGVKKVAV LYGNDDVFTK
SGYDNFKKAL EDLKIPVTTT ETFAKGDVDF KAQLTKIKAT NPDAIVLSAL IAEGGPIMVQ
ARQLGLNVPI IGGNGMNSVK VFDLAKDKSD NLWVGSPWSI ENHTAENSKF ITAYTAKYKA
APDQFAAQAY DAMYIASKAL KTVKFSGKLE ADRKAIRDAL PGVKHIGATG AFAFRQVTAR
GKPAGYDAVQ TPIVSVTKNG KYTIEK
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